Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2476 ATGTCGATGGAACAAGCAATTTTTGAAGAAGCATCATACGGCACATCATATGATGATAGTGATCAGTATAATTCTTGCGACGTTAATGTTCCATCGCTTAGTAAAGATGACACACAACATGTGGACAAGGGGAAAGAATCTGGAAACATTATTCAAGTAGAGGACAATGCAACGGCAGTGAATCATGAGTTACCCGATCACACTGGAATTCCATTAGATGAAATCCCGTACTTTTACTTTAATTATGCAAAGAAAGTTGGCTTCGTGACCAGGATTAGGAATACCAACTTTGACAAGACCAGGAAGGATTCAAAGATACCCGTTAACCAATCGTTACACTGTAGTCGTGAAGGTTATCGGGAGTCTCAAGTGAAGGCAGCAACTCAGACTTTTATGACGAACGTCGGATGTGGGTTCCAATATATTTTCAAGTCACTTCCAGTGTAG 447 0.4049 MSMEQAIFEEASYGTSYDDSDQYNSCDVNVPSLSKDDTQHVDKGKESGNIIQVEDNATAVNHELPDHTGIPLDEIPYFYFNYAKKVGFVTRIRNTNFDKTRKDSKIPVNQSLHCSREGYRESQVKAATQTFMTNVGCGFQYIFKSLPV* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2476 148 Pfam FAR1 DNA-binding domain 78 137 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2476 Amo-Chr2 78319170 78323028 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo02g2476 FAR1 7.2e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2476 - - ahf:112772717 223.016