Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2443 ATGTCTTACTACCAATCAGCAGAAAGAATCCCCGATCCATCATGGAAGTACGATGTGTATTTGAGTTTCCGAGGCCAAGACACTCGCTACCGATTCATCTCGGATCTCTATGAAGCTTTGACGAGAGCTGGGATTCTTGCTCTCCTTGACGATGAGGAGATTCAGCTAGGAGACCAGATCTCATACATACTAGTTCAAGCAATCGAAGCTTCTAGACTTTTTGTTGTTGTTTTCTCAGAAAGTTATGCTGCTTCTACATGGTGTCTGAAAGAGTTGACGAAAATAATGGAGTGTAGAAGCACTATAGGTCAAACTGTCATTCCGTTATACTACAATGTTGATCCCTCAGATGTACGCCACCAGAGAGGTCCTTTTGAAAAAGCTCTTCTACGTCACATGGATAGATATGAGAATGAGATAGTCCACGCATGGAGGGCTGCGCTCACTCAAGCTACTGAACTTTCTGGATTTCTAATCACTGGAGACAGTAATGAAGTTGAACTTGTCGGAGTGATTGTTGAACATATAACTACTCTACTTGCTTCGAAAGACTTGTTCATCGCAAGGCATCCAGTGGGAGTACAATCTCGCACGGAATATGTGATTCAAATGTTACATTCTCGTAAACCAGAAGATGTCGTGTTAATGGGGATATGGGGGATGGGAGGAGTGGGTAAAACAACCATTGCGAAAAGTGTTTATAATCAAATTCATCGCCATTTTGATAGGCCAATGTTCCTCCCAAACATTTGGGAGATGTGGGAGAATAACCAACAGGTTTTTCTGCAAGATCGGTTATTGAATGGTATTTGCAAAGCACAGATAAACGTACAAAACATCGCATCAGGAGTAGCTTTATTAAGGGAAAGACTTCGCCTGGAAAGAGTATTTCTTGTACTTGATGATGTAAATAATATAGAGCAGTTGAATGCCTTGTGCGGTGGTCGAGAATGGTTTGGTGCAGGGAGTATAATAATCATCACTACAAGAGATAGACGTCTGCTTCGTATGATTGGAGTTGATTATGTGTACCAAGTGAAAGAAATGGATTACAATGAATCTCTTCAACTTTTTTGTTGGAATGCATTTGGGAAAGCAACTCCTTTAACCGAGTTTGCTAGACTTGCAGAAGATGTAGTTGCATATTGTGGGGGATTGCCACTAGCCCTTGAAACAATTGGTTGTCAGTTGTATGGAAAGATGAAAGACGAGTGGGAGAATGTATTAGGTGGACTCAAAAGGTTTCCCCATCCGGATGTACACCAAGTTTTGAAATTAAGCTTTGATGGCTTAAATGATGACAGAGAGAAAGAAATATTTCTTGACATAGCTAGCTTTTGTATTGGCATGGAAAGGGGGGAGGTACTGAAAACACTAAATTATGGCTTTGGAATTAGCGAACATGGAATTAGTTTCCTTGAAGAGCAGAGTCTTATAACATTTGACGAGAAAGATAGAGTTCGAATGCATCCTTTGCTGCGTGACATGGGAAGAGAGATCGTTCGAGAGCAATCACAAACTGATGCTCAGCGAAGGACTTACGATGTTTTCGTGAGTTTTCGAGGCAAGGACACTCGTCCAACGTTTACATCACATCTCCATACATCTCTCCGAAATGCTGGAATTGCTGCTTACAAGGATGATGATGATGTTGATGGACTTCAAAGGGGAGAACGGATTTCAATCGCATTGTTAAAAGCAATTGGATTGTCTGCATGTTCTGTCATTGTTTTTTCAACCCACTATGCTGATTCAAAATGGTGCCTGCAAGAGCTTGAGAATATCATGGTTTGCCATAGAACAAAAGGTCAAGTGGTTTACCCTATATTCTACGGAGTAGATCCCTCAGATATACGTTATCAAAAGAAAGAGACTGACTTTGGGAAAGCTTTTGAAAGTCTTATAAGTCGAAGATCGGTGGAAGAAGATAAGGTGCAAAGTTGGAGAACAGATCTTCGTGAAGTTAGTAGCTTTCCAGGGACGACTGTGATCAACTCCTGGAACGAAAGTGAAGATATCAAAAGAATTGTTGAACACGTTACTCGTTTATTAGATAAGACAGAGTTGTTCGTTGCAGCGCATCCAGTGGGAGTAGAACCTCGTGTGCAAAAGTTGATTGAAGAGTCAAACATTCAAAAGACAAAAGATGTTCTGATACTTGGGATAAAGGGCATGGGGGGCGTAGGTAAAACGACTATTGCCAAAGCCATCTATAATAAAATTCGTCGCGATTTTGATGGCAGGAGCTTCCTCCTGAACATTAGAGAAACATGGAAGCAAGATAATGGAAAGGTTCTCTTGCAACAGCAACTTCTTGAGGATATATTCATTGCAACGAGTATACACATACGTAACATTGATTCAGGGATGCAAATATTAAAGGAAAGGCTTAGTGCTAAAAGGGTACTCATTGTGCTTGACGATGTGACTGATTTGGACCAACTCAATGCTTTGTGTGGTAGTGGTGAATGGTGTGGTCCTGGGAGCGTAGTAATCATCACAACAAGATATAATGATCTTCTTCGAGTGTGTAAACTCACATTCAATCTAGAAAAGATGAATAGGGCTGAATCCCTTGAGCTTTTTAGCTGGCATGCATTCAAACAAGCATGTCCAAAAGAAGAGTTTGTCAAGCTATCTAGAGATGTAGTTGAATATTCTAATGGATTGCCACTGGCTCTGGAAGTTCTTGGATCCCATTTGTTTAATATGGGAATAAAAGAATGGGAAAGTGCATTGGATACTCTGAAATCAATTCCCCATGATAAAGTCCAGAAGAAACTACAAATAAGTTTTGATGGTTTAAGTAAGAATTATGAAAAGGAAATATTCCTTGACATTGCATGCTTTTTTATTGGGATGGATCGGAATGATGTTGTGAAGATATTAAATGGTTGTGGACTCCGTGCAGAAATTGGAATCAGTGCACTTAAAGAGCGAAACCTTATAACTGTTGATAACAATAATATGCTTGGAATGCATGACTTGTTAAGAGATATGGGAAGAGCAATAATTTGTGAGAAATCACCTGAACTTGAAGAGCGAAGTAGATTATGGTATGATGAGAAAGTGCTTGAACTCTTAGAGAATCATGAGGGAACAGATTTAAAGGTTAAGGGATTGAGTTTGAAGTTGCCAATGACCAATTCCATTTGTTTGAGTAAAGAAGCATTTAAGAATATGACTAAACTTAAATTGCTTCAACTCGCCGGTGTACAACTTAATGGAGAGTTCAAACATGTTTCAAGATATCTTAGATGGATGAGTTGGCATGGATTTCCTTTGAGACACACTCCCATAGACTGCTATCAACCAAATATAATTTCCATTGAGTTAGAAAACAGCAAACTCAGAGTTCTGTGGAAGAGGTCCCTGTTGTTGAAGCAGCTGAAGATTTTAAATCTTAGTCATTCACATGACTTGATCAAAACCCCAGATTTTTCATACCTACCTAATCTTGAGAAGTTAGTACTCAAGGATTGTACAGAATTGTCTTTGATTTCCTATACCATTGGAACTCTAAAAAACATCCTTCATATCAATATAGAAGGTTGTACAAACCTTTCTGTACTTCCAAGAAGCATATACAAGTTGACATCTCTTGAAACTCTCCTCCTCTCTGGGTGTTCAAAGATTGATAAGTTAGAAGAAGATGTGGAACAAATGGAATCTTTGGCAGTGCTAAAAGCTGATAACACTGCCATAGCACAAGTGCCCGGTGCGCTAGCAAGATTAAGAAACCTTGGACATGTTTCTTTGTGTGGCTATGAAGGATTGGCATGTGATGTGATTCCTTTAATTATGTTTTGGTTATGGACTTCACCAAATAATATGTTGTCTTCAGTCATGCAAAAATGTTCATCAAATGTTTTCACTTATGCAAATTGGGGTCCACAGCTTCAGATAAAAGGAGATGTATCTTTGGATACTGGCAATGTGTCAAATTGCAATGAATTGGTGATGCATATTTCTGAATCAAAATCTTCTTTGAATTCCCTTTTGACTCAAATGGGGGTGGACAATTCTTTTACAGAGATACTTCAAAAGACCATTTCACAGCAGATGCATGATCCAGATGCACTCAGCGCATGA 4092 0.3937 MSYYQSAERIPDPSWKYDVYLSFRGQDTRYRFISDLYEALTRAGILALLDDEEIQLGDQISYILVQAIEASRLFVVVFSESYAASTWCLKELTKIMECRSTIGQTVIPLYYNVDPSDVRHQRGPFEKALLRHMDRYENEIVHAWRAALTQATELSGFLITGDSNEVELVGVIVEHITTLLASKDLFIARHPVGVQSRTEYVIQMLHSRKPEDVVLMGIWGMGGVGKTTIAKSVYNQIHRHFDRPMFLPNIWEMWENNQQVFLQDRLLNGICKAQINVQNIASGVALLRERLRLERVFLVLDDVNNIEQLNALCGGREWFGAGSIIIITTRDRRLLRMIGVDYVYQVKEMDYNESLQLFCWNAFGKATPLTEFARLAEDVVAYCGGLPLALETIGCQLYGKMKDEWENVLGGLKRFPHPDVHQVLKLSFDGLNDDREKEIFLDIASFCIGMERGEVLKTLNYGFGISEHGISFLEEQSLITFDEKDRVRMHPLLRDMGREIVREQSQTDAQRRTYDVFVSFRGKDTRPTFTSHLHTSLRNAGIAAYKDDDDVDGLQRGERISIALLKAIGLSACSVIVFSTHYADSKWCLQELENIMVCHRTKGQVVYPIFYGVDPSDIRYQKKETDFGKAFESLISRRSVEEDKVQSWRTDLREVSSFPGTTVINSWNESEDIKRIVEHVTRLLDKTELFVAAHPVGVEPRVQKLIEESNIQKTKDVLILGIKGMGGVGKTTIAKAIYNKIRRDFDGRSFLLNIRETWKQDNGKVLLQQQLLEDIFIATSIHIRNIDSGMQILKERLSAKRVLIVLDDVTDLDQLNALCGSGEWCGPGSVVIITTRYNDLLRVCKLTFNLEKMNRAESLELFSWHAFKQACPKEEFVKLSRDVVEYSNGLPLALEVLGSHLFNMGIKEWESALDTLKSIPHDKVQKKLQISFDGLSKNYEKEIFLDIACFFIGMDRNDVVKILNGCGLRAEIGISALKERNLITVDNNNMLGMHDLLRDMGRAIICEKSPELEERSRLWYDEKVLELLENHEGTDLKVKGLSLKLPMTNSICLSKEAFKNMTKLKLLQLAGVQLNGEFKHVSRYLRWMSWHGFPLRHTPIDCYQPNIISIELENSKLRVLWKRSLLLKQLKILNLSHSHDLIKTPDFSYLPNLEKLVLKDCTELSLISYTIGTLKNILHINIEGCTNLSVLPRSIYKLTSLETLLLSGCSKIDKLEEDVEQMESLAVLKADNTAIAQVPGALARLRNLGHVSLCGYEGLACDVIPLIMFWLWTSPNNMLSSVMQKCSSNVFTYANWGPQLQIKGDVSLDTGNVSNCNELVMHISESKSSLNSLLTQMGVDNSFTEILQKTISQQMHDPDALSA* 1364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2443 1363 Gene3D - 349 432 IPR042197 -
Amo02g2443 1363 Gene3D - 852 936 IPR042197 -
Amo02g2443 1363 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 682 947 IPR027417 -
Amo02g2443 1363 Pfam NB-ARC domain 703 927 IPR002182 GO:0043531
Amo02g2443 1363 Pfam NB-ARC domain 197 415 IPR002182 GO:0043531
Amo02g2443 1363 Pfam TIR domain 514 683 IPR000157 GO:0007165
Amo02g2443 1363 Pfam TIR domain 16 176 IPR000157 GO:0007165
Amo02g2443 1363 SUPERFAMILY "Winged helix" DNA-binding domain 922 1029 IPR036390 -
Amo02g2443 1363 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 157 IPR035897 -
Amo02g2443 1363 Gene3D - 692 849 IPR027417 -
Amo02g2443 1363 ProSiteProfiles TIR domain profile. 512 684 IPR000157 GO:0007165
Amo02g2443 1363 SUPERFAMILY L domain-like 1043 1333 - -
Amo02g2443 1363 Gene3D - 13 182 IPR035897 -
Amo02g2443 1363 Gene3D Ribonuclease Inhibitor 1039 1292 IPR032675 -
Amo02g2443 1363 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 510 IPR044974 GO:0006952
Amo02g2443 1363 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 26 510 - -
Amo02g2443 1363 Coils Coil 1212 1232 - -
Amo02g2443 1363 Gene3D - 183 342 IPR027417 -
Amo02g2443 1363 SUPERFAMILY Toll/Interleukin receptor TIR domain 507 660 IPR035897 -
Amo02g2443 1363 ProSiteProfiles TIR domain profile. 15 180 IPR000157 GO:0007165
Amo02g2443 1363 SMART AAA_5 212 350 IPR003593 -
Amo02g2443 1363 SMART AAA_5 716 854 IPR003593 -
Amo02g2443 1363 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 443 IPR027417 -
Amo02g2443 1363 SMART till_3 513 658 IPR000157 GO:0007165
Amo02g2443 1363 SMART till_3 16 154 IPR000157 GO:0007165
Amo02g2443 1363 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 524 1344 IPR044974 GO:0006952
Amo02g2443 1363 SUPERFAMILY "Winged helix" DNA-binding domain 419 506 IPR036390 -
Amo02g2443 1363 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 524 1344 - -
Amo02g2443 1363 Gene3D - 507 691 IPR035897 -
Amo02g2443 1363 PRINTS Disease resistance protein signature 1196 1212 - -
Amo02g2443 1363 PRINTS Disease resistance protein signature 887 901 - -
Amo02g2443 1363 PRINTS Disease resistance protein signature 719 734 - -
Amo02g2443 1363 PRINTS Disease resistance protein signature 796 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2443 Amo-Chr2 77616042 77624750 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2443 14 505 WRKY Transcription Factor Family AT4G12020 28.485 3.85e-45 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2443 - - ahf:112727525 2661.33