Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2400 ATGAAAATGGCTTCCAATTCCAAAAAATGGTGTTACTTTTTTCAATTAGTGCTTCTCTGTCTCACACTTTTGTTGCAGATAGCATCTAATCAAATTGAAGCTGGTGGTTCAAAAGTTGAATACCTTCCTGGTTTTGATGGTCCTCTCCCCTTTCAACTTGAAACTGGGTATGTGGGTTTGGGGGATTCAGAAGATGACATGCAAGTTTTCTACTACTTTATTAAGTCAGAGAATGATAGTAAGAATGACCCTCTTTTGCTATGGCTCTCTGGTGGTCCCGGTTGTTCTTCAGTTTGCGGCTTTATTTATGAAATAGGCCCAATGAAATTAAAAGTTGAGGAATATGATGGGAGCTTGCCTAAGCTCATCTCGAGGCCACAGTCATGGACAAAGGTGGCTAACATTATTTTTGTGGATTTGCCAATGGGAACTGGCTTCTCTTACGCCAAAAATGTCATTCCCCATCGAAGTGACTGGAAGCTTGTTCACCAAACCCATCTATTTATTAGAAAGTGGCTTGTTGAGAACCCGGAATTTCTTTCAAATAAGTTTTACATGGCAGCTGATTCATACTCCGGCATTCCTATTCCTCCTATTATTCAAGAGATCACTGATAGAAATGAAAGAGGTCTCAAACCCCGAATAAATCTCCAGGGATATATACTAGGAAACCCAGTAACATCAGGATTAGAAGATAATGATCAGATCCCATATGTTCACGGAATGGGACTTATCTCTGATGAACTCTATTGGTCCTTGCAAAATACTTGTCACGGTAACATTATAAATGTGGATTCTACGAACAAACCGTGTCTAAATGACATGCAGTATTATAACGAGCTTCTTGAAAATATTTGGTTGTTCAACATTTTGGAGATATATTGTCTTGATGAGAATATCAAAAGAACAAGACGAAACCCCAGCAGATCTCTGGCTCAAAAGATAAAGACACCTTTGAGTTCTCCGGTCACACTGCCGGATATGCGCTGTGAAATTTATCGTGACTTCCTTCTTGCGGAATGGATAAATGACCCTGCTGTCCGTAAGGCACTGCATATTCGCGAGGAAACTATAGGGAAATGGAACCGGTGCAATAGTGACGATTATGTATTTGAAATCCCTAGCAGCGTTCCATTTCATGCAAACCTAAGTGCCAAAGGCTACCCTTCCTTGATATACAGTGGGGATCACGATGCAGTAGTTCCTTTCTCCTCGACTCAACGATGGATAAGGTCTCTAAACTACTCTATTGTACATGATTGGAGGCCATGGTATTTAAATGACCAAGTTGCAGGATACACGAGGACTTACTCGAATCAAATGACATTTGCAACTATAAGAGGTGGATCGCATACAGCTCCAGATACCAAGCCGGACGAAAGTTTTGCCATGTTCCTTAGGTGGATATCTAACAAGCCTCTTTAG 1425 0.4084 MKMASNSKKWCYFFQLVLLCLTLLLQIASNQIEAGGSKVEYLPGFDGPLPFQLETGYVGLGDSEDDMQVFYYFIKSENDSKNDPLLLWLSGGPGCSSVCGFIYEIGPMKLKVEEYDGSLPKLISRPQSWTKVANIIFVDLPMGTGFSYAKNVIPHRSDWKLVHQTHLFIRKWLVENPEFLSNKFYMAADSYSGIPIPPIIQEITDRNERGLKPRINLQGYILGNPVTSGLEDNDQIPYVHGMGLISDELYWSLQNTCHGNIINVDSTNKPCLNDMQYYNELLENIWLFNILEIYCLDENIKRTRRNPSRSLAQKIKTPLSSPVTLPDMRCEIYRDFLLAEWINDPAVRKALHIREETIGKWNRCNSDDYVFEIPSSVPFHANLSAKGYPSLIYSGDHDAVVPFSSTQRWIRSLNYSIVHDWRPWYLNDQVAGYTRTYSNQMTFATIRGGSHTAPDTKPDESFAMFLRWISNKPL* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2400 474 Pfam Serine carboxypeptidase 43 471 IPR001563 GO:0004185|GO:0006508
Amo02g2400 474 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 13 471 - -
Amo02g2400 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Amo02g2400 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Amo02g2400 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 197 IPR001563 GO:0004185|GO:0006508
Amo02g2400 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 441 454 IPR001563 GO:0004185|GO:0006508
Amo02g2400 474 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 471 IPR001563 GO:0004185|GO:0006508
Amo02g2400 474 Gene3D alpha/beta hydrolase 45 474 IPR029058 -
Amo02g2400 474 SUPERFAMILY alpha/beta-Hydrolases 39 473 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2400 Amo-Chr2 76731589 76745314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2400 36 61 Calmodulin-binding Proteins AT2G22960 69.231 1.38e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2400 K16296 - gmx:100780069 639.417