Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2380 ATGGGATACTCTCTTTATCATCCTTTTTTGGTTGACGTTGCTGGAGTTATGACCGGTGTAGAGGGTGAGAGGGAATATGTGAACAATGACAAACTTATTAATATGATGATCATTCATATTGAGAATGACGGTTTAAAGCTTAATATTATTGTTCTTGGAGAGATGGTGGATCGGATCAAAGGTTTGGTGGCATCGGACGAACAACAACTGCCAATAGTTATTTTTCAATTTGGAAGGAACATTATGTATGGTACTAGACTCTTGATAAATCTAGATGTTCCTGAGGCTTTGATGCTTCGAAAAAGCGTGTACTATAGAGAGATCTCGAAGTACCTATCTGTGATTTCTGGCAAACCGGCATATCTTGATGAAGATGAAGTTTTATATTCTACTGGGAAGAAGACAATAAAAGAGTTACGTGCGGCTGCAGATATTGGATTCTATGTTGTTCTAGCAACTATTCTTGATGTTGAACCCGTTCCAAGTTGGTGGTATAAATCATGTGTTTTCAGCGTGAAGACAGAAGCTAATGTGAATGAATACTTCTGCGATGGCTGTAATAGGGACGTGAATAATGTGGTTGACAGGTATAAGTTGAATTTATTGGTTTTTGATGGTACTGCTACAACGAATTTTGTTGTGTTCGATAAGGAGGTCGCAGCTTTACTCGGACGAACCTGTACTGAAATGGTGAAAGAGTTGAATAAAAAAGGGGAAGCAAGCAAAGCTCCTAGTGGTTTTAATGAGTTTTTTCTTGATAAGGAGTTTTTATTCAAGGTCGAAGTAGAAACTACTGGATGGTGCGATTCTTATGATGTATCGGTGATACGTTCTGATTCTACCAGTTTACCAAGTTGGAGGGACGCTCAAGGCCTAGTAAAATCTGGTGTACTCCCTGCTAGTCCTGTTAACCCTGTTCAACCTCGAGGTGAAGATAAATGTTCTGTTTGTGATGAGTCACCTGATCCAAATGTGAAAAATTCGCCTGTTACTAAGAGACCTGTTGTCAGGGTATTCATTTAG 1023 0.392 MGYSLYHPFLVDVAGVMTGVEGEREYVNNDKLINMMIIHIENDGLKLNIIVLGEMVDRIKGLVASDEQQLPIVIFQFGRNIMYGTRLLINLDVPEALMLRKSVYYREISKYLSVISGKPAYLDEDEVLYSTGKKTIKELRAAADIGFYVVLATILDVEPVPSWWYKSCVFSVKTEANVNEYFCDGCNRDVNNVVDRYKLNLLVFDGTATTNFVVFDKEVAALLGRTCTEMVKELNKKGEASKAPSGFNEFFLDKEFLFKVEVETTGWCDSYDVSVIRSDSTSLPSWRDAQGLVKSGVLPASPVNPVQPRGEDKCSVCDESPDPNVKNSPVTKRPVVRVFI* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2380 340 MobiDBLite consensus disorder prediction 300 327 - -
Amo02g2380 340 Pfam Replication factor-A C terminal domain 149 269 IPR013955 -
Amo02g2380 340 Gene3D - 128 285 IPR012340 -
Amo02g2380 340 SUPERFAMILY Nucleic acid-binding proteins 146 273 IPR012340 -
Amo02g2380 340 CDD RPA1_DBD_C 133 263 IPR013955 -
Amo02g2380 340 Gene3D - 4 109 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2380 Amo-Chr2 76375749 76379364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2380 94 249 Core DNA Replication Machinery Family AT5G61000 26.582 1.33e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2380 - - ahf:112729129 556.214