Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2375 ATGGAGGTGACTTCGAGCGAGGAGGATGCTAATTGTGGAGGGAGTGAAGGTGATGCTTACGAAGTAGAAAATTCTGATTTGGAAGACCTTGCCGAACTGAGTGAGGAGGACATCCTAAAGAAGGTATGGGACAGCATTGATAATGCATATGAGTTCTATCGGGGTTTCAGAAAACTGCATGGGTTTGGGGTGCGAAAGGGTGACTCCGGAAAAGACTGTGAGGGGAATCTTGTAAGGTATAGATTTTTTTGTAACAAGGAAGGGTTGAGGGAACGTAAACACTACGACAGGGTTGACAGAACGAGGGTACACAAACCGGAGACAAGAACTAACTGCAAGGCAATGTTATCGGTTTATTTAGACAAAAATGATAAGTATTGGAAGGTTAGGAAGTTAGTTACTGAACACAATCACGAGTTGACACCGGCAGGAATGGTGCACTTGATTGCCAATCATCGTCGGTTAACGGAAGTTGCAAAAAGTCAGATAGTTGGGATGCAAGCACATGGTATTGCAACGTCTAAGATTGTGGGGTACATGGCTGGTATGGCCGGGGGCTATTTGTTGTTGGAGTTCCTGAAGAAGGATGTCTATAACTATGCTGACAAAAGGCAGCGCATTAAAATAGCTGATGGCGATGCAAATTCTGCATTAGTGTATCTAGAGAGAAAAGCCGAATCAGACCCCATGGCAATCGCAAAATATAATGTGACTACTGACAACTGGCTCGCAAATCTGATTTGGGCGGACAGATCTAGTAGAGTCGATTACCAATACTTTGGCGATGTGTTGGCGTTCGATTCAACCTACAGGAAAAATAAATACAAGAGACCGGTTGTGATTTTTTCTGAATCAAACAATCATAAGCAGACCACTATATTTGGGTTTGGGTTGTTGCTTGATGAAAGTTTGGCATCCTATCGGTGGATGCTGGAGAATTTGATGGAGATCATGTGTGGTAAGAAGCCATCTGTAGTGGTGATCAACGGGGATAAAGCAATGATAAAAGCAGTTTCTGAAGTCCTCCCCGAGTCGGCGCATCGGTTGTGTGCATGGCATGTGGAAAAGAACGTCACAACGAATGCGAAGGATGCTGATTTACGTGGGCTGTTCAGAAGATGGTTGTATGCGGACATGGCAACAGAGGTCTTTGAGTCGGAATGGGAGCAGGCCGCCGATGAGTATGGCCTCCGCCACAAGCAGGTGCCGTGCCAGATGTATGATAAAAAAGAGACGTGGGTAAGTGCTTATCTGCGTGACAAGTTCTGCGCGGGCTACCGGACTACATCCCGCTGTGAAGGAATTAACGCATACGTAAACAAGTTTTCGAAGTCCACCCACACAATTTTGGAGCTGGTACAGTGCTTAGAGATGGTTGCCTGTGAGTATCGGAATAAGGAGATGCTGCTCCAGTTTCAATCCATAAACTCAGTTCTGGTTATGACAACATGCCTCAGAAGTATTGAATGA 1470 0.4531 MEVTSSEEDANCGGSEGDAYEVENSDLEDLAELSEEDILKKVWDSIDNAYEFYRGFRKLHGFGVRKGDSGKDCEGNLVRYRFFCNKEGLRERKHYDRVDRTRVHKPETRTNCKAMLSVYLDKNDKYWKVRKLVTEHNHELTPAGMVHLIANHRRLTEVAKSQIVGMQAHGIATSKIVGYMAGMAGGYLLLEFLKKDVYNYADKRQRIKIADGDANSALVYLERKAESDPMAIAKYNVTTDNWLANLIWADRSSRVDYQYFGDVLAFDSTYRKNKYKRPVVIFSESNNHKQTTIFGFGLLLDESLASYRWMLENLMEIMCGKKPSVVVINGDKAMIKAVSEVLPESAHRLCAWHVEKNVTTNAKDADLRGLFRRWLYADMATEVFESEWEQAADEYGLRHKQVPCQMYDKKETWVSAYLRDKFCAGYRTTSRCEGINAYVNKFSKSTHTILELVQCLEMVACEYRNKEMLLQFQSINSVLVMTTCLRSIE* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2375 489 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 36 479 IPR031052 GO:0006355
Amo02g2375 489 Pfam MULE transposase domain 263 357 IPR018289 -
Amo02g2375 489 Pfam FAR1 DNA-binding domain 51 141 IPR004330 -
Amo02g2375 489 PANTHER OS02G0262500 PROTEIN 36 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2375 Amo-Chr2 76321006 76323850 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo02g2375 MULE 1.1e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2375 - - aip:107620053 860.907