Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2354 ATGAAACACTTGCCAAACATCTCTTTCATTGTACCTTATTCTTTTTCTTTAATATTTCTTATTTTTGTAGGAAAACCATTTTTTATTATTAGGTTGATTATGGATGCAGGGGAGAGAGAGCCAATGAAATGGGCAATGAGGTTGAGAGTGGCATTCTACTTAGCTCAAGGTCTAGAGTATTGCACAAGTAAAGGAAGGGGTTTGTATCATGATCTGAATGCCTATAGAATCTTGTTTGACCAGGATGGTAATCCTAGGTTGTCTTGCTTTGGCCTCATGAAGAACAGCAGAGATGGCAAGAGTTACAGCACTAATTTGGCTTTCACCCCTCCTGAGTATCTAAGGACTGGGAGAGTGACCCCAGAGAGTGTGGTTTATAGTTTCGGAACATTGTTGCTTGATCTCTTGAGTGGTAAACATATTCCCCCAAGCCATGCACTTGACCTTATTCGGGGGAAGAATTTCTTGATGTTAATGGATTCAGCGTTGGAGGGTCATTTCTCAAAAGATGATGGAACAGAGTTGGTTCGTTTGGCTTCTCGTTGTTTGCAGTATGAACCTCGTGAGAGGCCAAATGCTAAGTCTCTTGTTGCTTCTCTCATCTCACTTCACAAACAATCAGAGGTTCCCTCATATGTTCTGATGGGTCTGAAGCATGAAACTACATTATCCTCAACAAAGCAATTGGCATTGACACCTTTTGGGGAAGCTTGTTTAAGAGTGGACCTTACTGCCATACATGAAATATTAGAGAAGATTGGTTACAAAGATGATGAAGGAATTTCCAATGAGCTTTCATTTCAATTATGGACCAGTCAAATGCAGGAGACCTTGAATTTGAAGAAGCATGGAGATACTGCTTTTCGAGCTAAGGACTTTGCCACTGCCATTAACTGCTATACTCAATTCATAGATGGAGGCACAATGGTATCACCAACAGTGTATGCAAGGAGGTGCTTATCATATTTGATGAAAGAGAAAGGGGAAGAAGCATTAGAAGATGCAATGCAAGCCCAAACAGTGTCTCCTCAATGGCTCACTGCTTTGTATCTTCAAGCAGCTTGTCTCTTCACCCTTGGCATGGATAATGATGCTCAACAAACTCTCAACCATGCCACTAATATGGAACCCAAAACAAACAAAATTTGA 1149 0.4082 MKHLPNISFIVPYSFSLIFLIFVGKPFFIIRLIMDAGEREPMKWAMRLRVAFYLAQGLEYCTSKGRGLYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKDDGTELVRLASRCLQYEPRERPNAKSLVASLISLHKQSEVPSYVLMGLKHETTLSSTKQLALTPFGEACLRVDLTAIHEILEKIGYKDDEGISNELSFQLWTSQMQETLNLKKHGDTAFRAKDFATAINCYTQFIDGGTMVSPTVYARRCLSYLMKEKGEEALEDAMQAQTVSPQWLTALYLQAACLFTLGMDNDAQQTLNHATNMEPKTNKI* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2354 382 Gene3D Tetratricopeptide repeat domain 274 382 IPR011990 GO:0005515
Amo02g2354 382 Gene3D Transferase(Phosphotransferase) domain 1 31 217 - -
Amo02g2354 382 Pfam Protein tyrosine and serine/threonine kinase 38 200 IPR001245 GO:0004672|GO:0006468
Amo02g2354 382 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 32 381 IPR045845 GO:0004672|GO:0009742
Amo02g2354 382 SUPERFAMILY TPR-like 278 378 IPR011990 GO:0005515
Amo02g2354 382 ProSiteProfiles Protein kinase domain profile. 1 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g2354 382 SUPERFAMILY Protein kinase-like (PK-like) 38 208 IPR011009 -
Amo02g2354 382 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK6 32 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2354 Amo-Chr2 76061063 76068683 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2354 41 200 Glycoside Hydrolase AT3G07070 34.595 1.03e-20 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Amo02g2354 PK_Tyr_Ser-Thr 5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2354 - - gmx:100814477 620.157