Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2220 ATGGTAACAATCTTAGGTACTCATACAGTGATCCCAAAAGAAGAAACTCCAAAGGGTCTTCTATGGCTATCAGACAACGACCAACTTTGGCGATGGAGTCATACACCTTCAATCTACGTTTACAACCCAAAACAGAACAACAACACTGTCGTCGATGTCAATGTCCTCGTTGAGCGAATGCGAGATTCTCTCAGCGAGATTCTCGTTCACTACTATCCATTAGCCGGGAGGCTGAGTTGGACGGACGGTGGCCGTTTGGAACTCGATTGCAACGCAAAGGGGGTATTGCTTCTCGAAGCTGAATCGAAGAAATCAATGGCGGAATATGGAGACTTCACTCCAAATGAACCCAGCATCAAAGAACTCATCCCAGCTGTTGACTACTCTRGTCAAATAAACGAGCTTCCTTTGTTCTTGGCACAGGTGACAAAGTTCCACGGCGGCGATGGCGGCTTTGCAGTCGGAATCCTTTTTTCTCATCCATTAGGCGARGGCCTSGCCGCCATTCGCTTCATCAACTCATGGGCGAAGCTCACTCGAGGTGCGAAGCTAGATCCAAGCGAGCTTCCGTTTCTCGACCGAACCGTGCTCAAACCAACRGGGCCATTAACTCKACCCCMGTTCGACCACCSGGAGTTCAAGCCTCTGCCGCTCATCCTCGGAAGAACCGACAACATCGAAGAGCAAAAGAAGAAGACGACCTTCGCGCTGTTAAAACTCACACCAGAACACGTCCAGAAGCTCAAAAAGAATGCAAATGCAAATGTAACKGCAAARGGAAACGGTAACGCTCCTCATAACCCATCTCCGAGACCGTACAGCAGATTCGAAATTATCAGCGCACATATATGGAGATGCGCTTGCAAAGCTCGTAATCTTGAAGAGAATCAACCAACGGTCGTTAAATTCAACGTCGATATTCGCAACAGATTGAATCCGCCACTTCCTCAAAACTACTTCGGAAACGCGTTGGGTCCGACGGTTACSCCAACTTGCTACGCTAAAGAAATCACCACTCAACCAATCAGTTACGCATCGCAGAAAATAAGGGAAGCTGTTAATAAAGTGTCGAATCACGAGTTTGTTAAATCKCAAATGCATTACGTGGCAGGGTTTGAAAACCGTTGGGATCTGATTAGAACACCTTATTTGGAGAAAGGTGAGTATAGAGCTGATGTGCCTTTCTTTGGGAATCCTAACATTATACTTGGCAGTTGGATGAGCATGCCGTTTTATGAGGCTGATTTTGGGTTGGGGAAGCCGTTTTATTTTGGTCCTGGTGGTGTGTGTCCTTATGATAGAGGGGTTATTGCTCTAATGCCTGACGAAGATGGTGATAATGGATATGGTGTTGTGGTGTACATGCACTTTCAGGTAGACCACATGAAAGATTTRATCAAATACTTTTGGGAAGATATTTGA 1422 0.4585 MVTILGTHTVIPKEETPKGLLWLSDNDQLWRWSHTPSIYVYNPKQNNNTVVDVNVLVERMRDSLSEILVHYYPLAGRLSWTDGGRLELDCNAKGVLLLEAESKKSMAEYGDFTPNEPSIKELIPAVDYSXQINELPLFLAQVTKFHGGDGGFAVGILFSHPLGEGLAAIRFINSWAKLTRGAKLDPSELPFLDRTVLKPTGPLTXPXFDHXEFKPLPLILGRTDNIEEQKKKTTFALLKLTPEHVQKLKKNANANVTAKGNGNAPHNPSPRPYSRFEIISAHIWRCACKARNLEENQPTVVKFNVDIRNRLNPPLPQNYFGNALGPTVTPTCYAKEITTQPISYASQKIREAVNKVSNHEFVKSQMHYVAGFENRWDLIRTPYLEKGEYRADVPFFGNPNIILGSWMSMPFYEADFGLGKPFYFGPGGVCPYDRGVIALMPDEDGDNGYGVVVYMHFQVDHMKDLIKYFWEDI* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2220 473 Gene3D - 222 471 IPR023213 -
Amo02g2220 473 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 473 - -
Amo02g2220 473 Pfam Transferase family 1 465 - -
Amo02g2220 473 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 5 473 - -
Amo02g2220 473 Gene3D - 1 215 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2220 Amo-Chr2 72935374 72937475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2220 2 471 Monolignol Biosynthesis Gene Families AT5G48930 34.043 4.14e-82 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2220 K13065 - gmx:100779814 503.056