Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2212 ATGGCTTCTAATAATCAAGTGCTGCTTCTTGCATTCACACTCACACTCACACTTTTCTTGCAGCTTCTACCATCTCAGATTGAAGGTATTGGTGCAAAAGTTGAAAACCTTCCTGGTTATGATGGACCCCTTCCCTTTCATCTTGAAACCGGGTATATTGGGTTGGGGGATTCAGATGATGAGATGCAAGCTTTCTACTATTTTATTAAGTCAGAGAATGATCCTAAGAATGACCCTCTTTTGCTATGGCTCACTGGTGGCCCCGGTTGTTCTTCATTTTCCGGCCTTGTTTATCAAATAGGTCCAATGAAATTCAAAATTGAGGAATTTGATGGGAGCTTGCCTAAGCTCATCCCGAGGCCACAGTCATGGACAAAGGTGGCTAACATTATTTTTGTGGATTTGCCAATGGGAACTGGATTCTCTTACTCCAAAAATGTCCTTCCCCATCGAAGTGACTGGAAGTTTGTTCACCAAACCCATCGATTTATTAGAAAGTGGCTTGCTGAAAACCCGGAATTTCTTTCAAATAAGTTCTACATGGCAGCTGATTCGTACTCCGGCATTCCTGTTCCTCCTATTACTCAAGAGATCGCTGATGGAAATGAAAGAGGTCTCGAACCCCGGATAAATCTCCAGGGATATATACTAGGAAACCCACTAACATCAGGATTAGAAGAGAATGATCGGATCCCATATGTTCACGGAATGGGGCTTATTTCTGATGAACTCTACTGGGTAAATGAAATGCCAGTGATTCTAACATGTTTGTTATCTATGGATACAGTCCTTGAAAAGAACTTGTCATGGCAACATTATAAATGTGGATCCTACAAACAAATTCTTCTTGAAAATATTGAGTTGTACAACATTTTGGAGATATATTGTGTTGATGAGAATATCAAAGGAACAAGACGGAACCCCAGGAGATCTCTGGCTCAGAAGATAAAGGCACCTTTGAGTTCTCCGGTCACAGTGCCGGATATGCGCTGCCAAATTTATGGTTTCTTCCTTGGTACGGAATGGATGAATGACCCTGCTGTCCGTAAGGCACTGCATATTCGCGAGGGAACTATAGGGAAATGGAACCGGTGCTATAGTGACGATTATGTATTTGACATCCGTAGCAGCGTTCCGTTTCATGCGAATCTAAGTGCAAAAGGCTACCCTTCCTTGATATACAGTGGGGATCACGATGCAGTAGTTCCTTTCTCGTCGACTCAACGATGGATAAGGTCTCTAAATTACTCCATTGTAGATGATTGGAGGCCATGGTATTTAAATGACCAAGTTGCAGGATACACGAGGACTTACTCGAATCAAATGACATTTGCAACTATAAGAGGTGCAGGGCATACAGCTCCAGAGACCAAGCCGGACGAAGGTTTTGCCATGTTCGTTAGGTGGATATCTAATAAGCCTCTTTAG 1428 0.4258 MASNNQVLLLAFTLTLTLFLQLLPSQIEGIGAKVENLPGYDGPLPFHLETGYIGLGDSDDEMQAFYYFIKSENDPKNDPLLLWLTGGPGCSSFSGLVYQIGPMKFKIEEFDGSLPKLIPRPQSWTKVANIIFVDLPMGTGFSYSKNVLPHRSDWKFVHQTHRFIRKWLAENPEFLSNKFYMAADSYSGIPVPPITQEIADGNERGLEPRINLQGYILGNPLTSGLEENDRIPYVHGMGLISDELYWVNEMPVILTCLLSMDTVLEKNLSWQHYKCGSYKQILLENIELYNILEIYCVDENIKGTRRNPRRSLAQKIKAPLSSPVTVPDMRCQIYGFFLGTEWMNDPAVRKALHIREGTIGKWNRCYSDDYVFDIRSSVPFHANLSAKGYPSLIYSGDHDAVVPFSSTQRWIRSLNYSIVDDWRPWYLNDQVAGYTRTYSNQMTFATIRGAGHTAPETKPDEGFAMFVRWISNKPL* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2212 475 Pfam Serine carboxypeptidase 38 472 IPR001563 GO:0004185|GO:0006508
Amo02g2212 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Amo02g2212 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
Amo02g2212 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
Amo02g2212 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 442 455 IPR001563 GO:0004185|GO:0006508
Amo02g2212 475 Gene3D alpha/beta hydrolase 34 475 IPR029058 -
Amo02g2212 475 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 17 472 - -
Amo02g2212 475 SUPERFAMILY alpha/beta-Hydrolases 34 474 IPR029058 -
Amo02g2212 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 17 472 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2212 Amo-Chr2 72641165 72646534 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2212 342 475 Calmodulin-binding Proteins AT2G22960 64.444 9.32e-55 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2212 K16296 - gmx:100780069 625.935