Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2206 ATGGTGGTTCATTCTTCTCCCCTCTCTTTTCAAGTACTGTTTCTTGTTCTCACGATTTTGCTGCAGATAGAATCTCATCAGATTGAAGATGTTGCTGCAAAAGTTGAACACCTTCCTGGTTTTGATGGCCCACTCCCCTTTCACCTTGAAACTGGGTACGTGGGATTGGGGGACACAGATGATGACTTGCAAGTATTTTACTATTTTATTAAGTCAGAAAATGATCCTAAAAATGACCCTCTTATGCTATGGCTAACTGGTGGTCCTGGTTGTTCTTCATTTTCTGGCCTTGTCTACCAAATTGGTCCGATAAAATTTAAAATTGAGGAATACAATGGGAGCTTACCTAATTTGGTCTTGAGGCCACAGTCATGGACAAAGGTCTCTAGCATTATTTTTGCTGATTTGCCAATTGGAACAGGCTTCTCTTATGCCAAGAATGTCACCGCACATCGCAGTCATTCGAAATTAATTAACCATACCCATCTATTTATTAGGAAGTGGCTTCTGGAACACCCGGAATTTCTTTCAAATAAATTTTACATGGGAGCTGATTCATACTCTGGAATTCCTGCCCCGGGTGTTGTTCAAGAAATTTTAAATGGAAATGATCAAGGTCTTCAACCATGGATAAATCTCCAGGGTTATCTATTAGGAAACCCGATTACCACTGGAAAAGAGTCAAATGATAAGATGCAATATACTCATGGAATGGCACTTATTTCCGATGAACTCTATTTGTCTTTGCAGAGAAATTGTAAAGGGGAGTATATTGATATAGATGCCAAAAATGAATTGTGTTTAAGAGACATGCAATACTATCAAGAGTGCCTTTCGGGGATTAATCCATCGTACATTTTGGGTGAAGATTGCAAAGTTGATTTTCTTATGGATGATGAAGGGACACAGGGGAGACTTTTGACTCAGAAGTTGGAGGGTCCTCTTAGTTCATATCTAACTGTGCCAACAGTGATCTGCCAAAATTATTTTCTTACCACCCAATGGGCCAACTCCCAGAGTGTTCGCAAGGCATTGCATGTGAGAGAGGAAATAGGAAAATGGAAACGGTGTTACACTACTGATTTTGACTTCGACATCACTAGCAGCTTCGAATTTCATGTAAATCTCAGTGCAAAAGGCTACCGTTCCTTGATATTCAGCGGCGATCACGACTTAGTTGTTCCTTTCTTGTCGACTCAAGCATGGATAAGAGCTCTAAACTACTCCATTCTCGATGATTGGAGGCCATGGCTTGTAAATGGCCAAGTTGCAGGGTTTACAAGGACTTACTCAAATCAAATGACGTTTGCAACTGTGAAGGGTGGAGGGCATACAGCTGCTGAGTACAAACCAGATGAATGTTTAGCCATGTTCTCTAGGTGGCTCTCTAATGTCCCTTTATGA 1404 0.4081 MVVHSSPLSFQVLFLVLTILLQIESHQIEDVAAKVEHLPGFDGPLPFHLETGYVGLGDTDDDLQVFYYFIKSENDPKNDPLMLWLTGGPGCSSFSGLVYQIGPIKFKIEEYNGSLPNLVLRPQSWTKVSSIIFADLPIGTGFSYAKNVTAHRSHSKLINHTHLFIRKWLLEHPEFLSNKFYMGADSYSGIPAPGVVQEILNGNDQGLQPWINLQGYLLGNPITTGKESNDKMQYTHGMALISDELYLSLQRNCKGEYIDIDAKNELCLRDMQYYQECLSGINPSYILGEDCKVDFLMDDEGTQGRLLTQKLEGPLSSYLTVPTVICQNYFLTTQWANSQSVRKALHVREEIGKWKRCYTTDFDFDITSSFEFHVNLSAKGYRSLIFSGDHDLVVPFLSTQAWIRALNYSILDDWRPWLVNGQVAGFTRTYSNQMTFATVKGGGHTAAEYKPDECLAMFSRWLSNVPL* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2206 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Amo02g2206 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Amo02g2206 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 193 IPR001563 GO:0004185|GO:0006508
Amo02g2206 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 434 447 IPR001563 GO:0004185|GO:0006508
Amo02g2206 467 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 15 465 - -
Amo02g2206 467 SUPERFAMILY alpha/beta-Hydrolases 35 466 IPR029058 -
Amo02g2206 467 Gene3D alpha/beta hydrolase 28 297 IPR029058 -
Amo02g2206 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 15 465 IPR001563 GO:0004185|GO:0006508
Amo02g2206 467 Pfam Serine carboxypeptidase 39 464 IPR001563 GO:0004185|GO:0006508
Amo02g2206 467 Gene3D - 323 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2206 Amo-Chr2 72524951 72553128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2206 311 467 Calmodulin-binding Proteins AT2G22960 55.975 1.89e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2206 K16296 - gmx:100780069 692.189