Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2195 ATGCAGTGTCTGATTTGTAATGGGCCTAAGCCCAATATTAAATTAATTTCGAAGCTTAACCCGGCCCAACTCGGCCCAACCCAGCCACTGCTCATATGTCATATCCATAACCAGCCGAAAACCCTAGCTACTCTCTTGATTCCACAAAACCCTAGCTTCAACCATGAGAGTGATGCGCTGAGAGAAGCCATCACAGGAATTGTGGCTGATTCGAAAGAGAAGAATAGGAAGTTTGTTGAGACCATTGAGCTCCAAATTGGACTCAAAAACTATGATCCACAAAAGGACAAGCGTTTCAGTGGTTCTGTAAAGTTGCCACACATCCCAAGGCCCAAGATGAAAATCTGCATGCTTGGAGATGCTCAGCATGTTGAAGAGGCTGAGAAAATAGGATTGGATTGGATGGATGTTGAAGCATTGAAAAAGCTTAACAAAAATAAGAAATTGGTGAAGAAACTTGCCAAGAAATATCATGCTTTCTTGGCTTCTGAAGCAGTCATTAAGCAGATTCCTCGTCTCTTGGGTCCTGGTCTCAACAAGGCAGGCATACCTTATATGTTGCGCGTATCTTTTGAATTTCAGTTTTCACCTTTTGCTGCTTTTGAAATTCCTCCTGACTTTGCAGGAAAGTTTCCCACACTTGTTACCCACCAAGAATCTCTCGAGTCAAAAGTTAACGAGACAAAGGCTATGGTCAAGTTTCAGCTTAAGAAGGTGCTCTGCATGGGAGTAGCCGTTGGCAATGTTAGTATGGAAGAAAAGCAAATCTTTCAAAACGTACAACTGAGTGTTAACTTCCTTGTTTCCCTGTTGAAAAAGAACTGGCAGAACGTTAGGTGCTTGTATCTGAAGAGTACCATGGGAAAATCTTACCGTGTGTTTTAA 885 0.4226 MQCLICNGPKPNIKLISKLNPAQLGPTQPLLICHIHNQPKTLATLLIPQNPSFNHESDALREAITGIVADSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKIGLDWMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGIPYMLRVSFEFQFSPFAAFEIPPDFAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2195 294 SUPERFAMILY Ribosomal protein L1 208 294 IPR023674 -
Amo02g2195 294 Gene3D - 215 292 - -
Amo02g2195 294 Gene3D - 55 170 - -
Amo02g2195 294 PANTHER 60S RIBOSOMAL PROTEIN L10A-3 56 187 - -
Amo02g2195 294 PANTHER 60S RIBOSOMAL PROTEIN L10A-3 208 292 - -
Amo02g2195 294 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 56 187 - -
Amo02g2195 294 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 208 292 - -
Amo02g2195 294 SUPERFAMILY Ribosomal protein L1 56 182 IPR023674 -
Amo02g2195 294 Pfam Ribosomal protein L1p/L10e family 73 288 IPR028364 -
Amo02g2195 294 CDD Ribosomal_L1 60 293 IPR028364 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2195 Amo-Chr2 72116929 72119042 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2195 56 294 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 78.661 2.72e-117 334