Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2188 ATGTCCAAAATAAACAGAGCTTGGAATTCAATGGGTGTTCTTCATCCCATGGTTATGGCTGCTTATATACTTGTTTCCTCTGTCACAGCTTCTAACGCAGTTGTTTCCTCTGTCACAGCTTCTACGGCAGTTGTTTCCTCTGTCACAACTTCTATGGCAGTTAATGATTCCATTGGTCTTTCCCAGTACATGATTGATGGTGAGACCTTAGTGTCCAAAAATGGATTATTTGAGCTTGGATTCTTCAGACCCGGCAACTCGACCAAGTGTTACTTGGGGATCTGGTACAAGAAAATGGCCATGCATGCTGTTGTTTGGGTTGCTAACAGGGTTAACCCCATCAATGGTTTCTCAGGAAACTTAACAATGGACAACACCGGAAATCTTATCCTTAAAAACAATGGCTCAGTTGTTTGGAGCACGGCCTCTCAAAGAGAACCACGGAATCCGGTGGCACAGCTCATGGACAGTGGCAATCTTGTGATATGGAATGGTGGAGGTGCAGAGTCAAATGAAATTTTGTGGCAAAGCTTTGACTATCCAACTGATACATGTTTGCCAGGCATGAAGATAGGAAGGAATCTCCAAAATGGTTCGGATTGGCGATTAACATCTTGGAAGAGTGTAGATGATCCTTCTCCAGGTAACTTCTCTTGGGGGTTAGCCCTCAGTGATTATCCTGAGTTTGCCATCATGAATGGAACCAAAAAGTTCTCTCGGATTGGACCTTGGAATGGCTTGTATTTTAGTGGATTGCCAAACCTAATTGCTGATTCTAACTCTGGTATTATATTCATCGATGTCGACAACCAGAACGAGATATACTACACCTCTAGCTCCAAGAATGATTCTATCATCTCCAGAGTTGTAATAAACCAAACAAGTAAAGCGTATAGTCGGTATGTCTGGGTGGAAAAGACTCATACTTGGAGTGTTTTTGAGTCATTGCCTAATGATGTCTGTGATAATTATAACCTTTGCGGAGCCTATGGGAGTTGTATGACCACAGCAGCTCAAATTTGCCGTTGTTTAAGAGGTTTCAGGCCCAAGTCACCAGAAGCATGGAACTCATCAAACTGGGCTCAAGGATGTGTCCACAATGAACCATTAAGCTGCACTGGCATTACCGAAAGCACTGATGGATTTGTCAAATACACAGGCTTGAAACTACCAGATACTGAACGTACTAGGCTGATTGATACTCTTGATATAGGTGACTGCAGGGCTTTGTGCTTGAATAATTGCTCTTGTACGGCTTATACTAATCCAGACATAAGGATGGGTGGTGTTGGCTGTGTCATGTGGTTCGGCGATCTATTTGACATCAAACTGTTTCAATCTGGTGGACAAGATCTATACATCCGAATGCCTGCTTCTGAGTTAGACGAACTTCAAGATTCCAACAATGAACTTCAACACAGGAGCAAGAATAATAAAGTGATCATTGTTAGCACCGTTGCTGCAATTTGTGGGACGTTCTTACTTTGTGTTTTCGTTATATATAGATTTCGAAGGAACAGTAATGAAAAATCAAAGATACAAGAGTATATGGAAGGCTATGTAAATGATACGGATCTACCACTATTTGATCTACTGACTATTAATATTGCCACTAACAAGTTCTCGCTCGATAATAAGATCGGACAAGGTGGTTTTGGACCTGTGTATAAGGGAAAATTAGAACATGGACAAGAAATTGCTGTTAAGCGACTCTCACATAGCTCTAGGCAAGGAATGGCTGAATTCATAACTGAAGTAAAACTAATTGCAAAACTTCAGCACCGTAATCTAGTAAAACTTCTTGGTTGTTGCATTCAAGGAGAAGAAAAATTGCTAGTTTATGAGTATGTGGTTAATGGTAGCCTAGACACCTTCATTTTTGATCAAGCAAAAAGTAACTTGTTGGATTGGCCTCGTCGCTTCCTCATAATATTTGGAGTTGCTAGGGGACTCTTGTATCTTCATCAAGATTCTAGACTGAGGATTATCCATCGGGATCTTAAAGCAAGTAACATTTTACTAGATGATAAATTAAATCCAAAAATATCAGATTTTGGAATGGCCAGAACTTTTGGAGGAGATCAAACGGAAGGAAACACAAATAGAGTTGTTGGAACTTATGGGTACATGGCWCCAGAGTATGCTATCGATGGGCTATATTCTATAAAATCCGARGTCTTRAGCTTTGGCATACTTATYATGGAYATTATATGTGGAACCAAAAATAGAGCTCTTTGCCATGCAAATCAGACCCTTAATCTCATTGGTTATGCTTGGAGGCTATGGAAAGAGGAGAAGGCTTTAGAGTTGATAGATTCAAGCATAAAGGAGTCATGTGTAATCTCAGAAGCATTGCGAGGCATCCATGTGAGTCTGTTGTGTGTGCAACAATACCCTGAAGATAGGCCTACAATGGCTTCTGTGATTCTCATGTTAGGAAGTGAGATAGATTTAGTTGAGCCTAAAGAGCCCGGCTTCTTTCCCAAGAGGGTTTCTATCGAAGCGAATTCGCAGCTACATCAATGTGAAGTATCTACAAATGATGAATTAACTGTTACCTCATTAGATGGCCGGTGA 2577 0.4075 MSKINRAWNSMGVLHPMVMAAYILVSSVTASNAVVSSVTASTAVVSSVTTSMAVNDSIGLSQYMIDGETLVSKNGLFELGFFRPGNSTKCYLGIWYKKMAMHAVVWVANRVNPINGFSGNLTMDNTGNLILKNNGSVVWSTASQREPRNPVAQLMDSGNLVIWNGGGAESNEILWQSFDYPTDTCLPGMKIGRNLQNGSDWRLTSWKSVDDPSPGNFSWGLALSDYPEFAIMNGTKKFSRIGPWNGLYFSGLPNLIADSNSGIIFIDVDNQNEIYYTSSSKNDSIISRVVINQTSKAYSRYVWVEKTHTWSVFESLPNDVCDNYNLCGAYGSCMTTAAQICRCLRGFRPKSPEAWNSSNWAQGCVHNEPLSCTGITESTDGFVKYTGLKLPDTERTRLIDTLDIGDCRALCLNNCSCTAYTNPDIRMGGVGCVMWFGDLFDIKLFQSGGQDLYIRMPASELDELQDSNNELQHRSKNNKVIIVSTVAAICGTFLLCVFVIYRFRRNSNEKSKIQEYMEGYVNDTDLPLFDLLTINIATNKFSLDNKIGQGGFGPVYKGKLEHGQEIAVKRLSHSSRQGMAEFITEVKLIAKLQHRNLVKLLGCCIQGEEKLLVYEYVVNGSLDTFIFDQAKSNLLDWPRRFLIIFGVARGLLYLHQDSRLRIIHRDLKASNILLDDKLNPKISDFGMARTFGGDQTEGNTNRVVGTYGYMAPEYAIDGLYSIKSEVLSFGILIMDIICGTKNRALCHANQTLNLIGYAWRLWKEEKALELIDSSIKESCVISEALRGIHVSLLCVQQYPEDRPTMASVILMLGSEIDLVEPKEPGFFPKRVSIEANSQLHQCEVSTNDELTVTSLDGR* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2188 858 ProSiteProfiles Bulb-type lectin domain profile. 55 175 IPR001480 -
Amo02g2188 858 SMART serkin_6 541 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g2188 858 SMART blect_4 61 181 IPR001480 -
Amo02g2188 858 PIRSF SRK 27 858 IPR024171 GO:0004674
Amo02g2188 858 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 54 854 - -
Amo02g2188 858 Pfam S-locus glycoprotein domain 240 351 IPR000858 GO:0048544
Amo02g2188 858 Pfam PAN-like domain 372 442 IPR003609 -
Amo02g2188 858 ProSiteProfiles PAN/Apple domain profile. 372 457 IPR003609 -
Amo02g2188 858 CDD PAN_AP_plant 369 457 - -
Amo02g2188 858 ProSitePatterns Serine/Threonine protein kinases active-site signature. 662 674 IPR008271 GO:0004672|GO:0006468
Amo02g2188 858 Gene3D Transferase(Phosphotransferase) domain 1 617 820 - -
Amo02g2188 858 Gene3D Phosphorylase Kinase; domain 1 502 616 - -
Amo02g2188 858 CDD B_lectin 66 181 IPR001480 -
Amo02g2188 858 Gene3D - 48 178 IPR036426 -
Amo02g2188 858 SUPERFAMILY Protein kinase-like (PK-like) 519 812 IPR011009 -
Amo02g2188 858 Pfam D-mannose binding lectin 104 207 IPR001480 -
Amo02g2188 858 ProSiteProfiles Protein kinase domain profile. 541 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g2188 858 Gene3D Hepatocyte Growth Factor 373 453 - -
Amo02g2188 858 PANTHER - 54 854 - -
Amo02g2188 858 Pfam Protein tyrosine and serine/threonine kinase 542 809 IPR001245 GO:0004672|GO:0006468
Amo02g2188 858 SUPERFAMILY alpha-D-mannose-specific plant lectins 104 212 IPR036426 -
Amo02g2188 858 ProSiteProfiles EGF-like domain profile. 317 353 IPR000742 -
Amo02g2188 858 SMART ntp_6 377 456 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2188 Amo-Chr2 72034369 72038371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2188 466 838 Receptor kinase-like Gene Family AT4G23190 51.181 1.41e-125 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo02g2188 PK_Tyr_Ser-Thr 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2188 - - aip:107612694 1707.96