Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2169 ATGGATGAGTTGAAATCAGAGGAAGGTTGTATAGAGAATAAGCAATCAACAGCTGCTTCTAGCTCCTTTGTATCAGAAGGCAGTGGCAGTTCTATACCAAAGTCCCCGGGGATAGGTAGCCAGGCATCGGCTTCACCCCCTCATCGYAGAACRACTGGTCCTATAAGGCGAGCAAYGGGTGSTTGGACAGCAGAGGAGAATTATTATGAAGTTGAACCACGYSAATTTGTCTTTGCGAATCATAAGACAATATTTTCTGTACCACCTGAGTTTTTCCCTGATAGATCAGAAGTTCAATGTCTGCACAGATGGCAAAAAGTTCTTAATCCAGAACTTGTTAAAGGACCTTGGACTAAGGAGGAGGATGACAAAATAGTTGAAATGGTGTCAAAATATGGGCCATCYAAATGGTCTTTGATAGCAAAGTCCTTGCCTGGTCGAATAGGAAAACAGTGTCGAGAACGGTGGCACAATCATCTTAATCCCGACATAAAGAAGGATGCTTGGTCTTCGGAAGAGGAGTTGGCCCTCATGAATGCTCATCGCATATATGGAAACAAATGGGCTGAAATTGCTAAGGTTCTTCCTGGAAGGACTGATAATGCTATAAAGAACCACTGGAATAGTTCGCTAAAAAAGAAGATGGATTTCTATTTAGCCACYGGAAGACTTCCACCAACTTTGAAGAACAGTCCACAAGTTGTTGTRAAAGACACTGTTAGACATTCTAAACCTACATTATTTGTTTGTTCAAATAAAGAATCAGATACTGCAGTTGAATCTTCATCGGAAACTACAGAAATTACTCAACTAMATAGCAGTGACKAGAAMGACAAGAATCGACTAGAGTGCTTMGTAYCAGTTGGAGATTCCTCTGGTGCTCCTCTTGTAAATGAATCTGTTGATACTGAATGRAAAGCTGGATCATCCAACATAAATCTCAGCTGCAACGACTCAGAACTGGTGTCAAGAGATAATTTCCAAGTACATAGTATAAAGAACTCTGAGAATCCTGGACTGGTTGGCAAACCGAATGAGAGTTGCAGAGACAATGCTAAYATGAGCAATAACAGYTTCTGRAGAACATGTTTTTCACACGAAACTCCGGTCTCTGGTTCTTTATGCTACGAGCCACCACAGTTAGACWTTTCAGTCCCTTTAGATTCTCTTTATTCCAATATCCTTCATGAGCAGAATGACTGCTCTTCTCCGATTGCGTCATCCGTTGGTTTCTTCTCTCCACTTGGTGTAAATGGTAGTGAAAACGTAACCCCRGAATCAATATTGAAAATGGCAGCAAAAACTTTTCCGAGTACTCCTTCAATAATGAGGAAGAGAAGGACTGTTTCCCAAGCACATGTCACTCCTAGTAAAGCTTTGAAAGCAGATATTGATTCACAGACGTCTAAAGTACAAGAGAGATCCAAGGATAACTCTGATTCTATAGTTGGGAGCGACATTATTAATAATAATAAGGATTTCAATGCATCTCCCCCCTATCGACTTAGACCAAAGCGGACCGCAGTTGTCAAGTCMATTGAGAAACAGCTTGAGTTTGCATTTGAAAAGGAGAAGGATGACAGTGGTATGCATAAAGTACAAGGAGGTGCTTTGTCATGA 1620 0.4056 MDELKSEEGCIENKQSTAASSSFVSEGSGSSIPKSPGIGSQASASPPHRRTTGPIRRAXGXWTAEENYYEVEPRXFVFANHKTIFSVPPEFFPDRSEVQCLHRWQKVLNPELVKGPWTKEEDDKIVEMVSKYGPSKWSLIAKSLPGRIGKQCRERWHNHLNPDIKKDAWSSEEELALMNAHRIYGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKMDFYLATGRLPPTLKNSPQVVVKDTVRHSKPTLFVCSNKESDTAVESSSETTEITQLXSSDXXDKNRLECXVXVGDSSGAPLVNESVDTEXKAGSSNINLSCNDSELVSRDNFQVHSIKNSENPGLVGKPNESCRDNANMSNNSFXRTCFSHETPVSGSLCYEPPQLDXSVPLDSLYSNILHEQNDCSSPIASSVGFFSPLGVNGSENVTPESILKMAAKTFPSTPSIMRKRRTVSQAHVTPSKALKADIDSQTSKVQERSKDNSDSIVGSDIINNNKDFNASPPYRLRPKRTAVVKSIEKQLEFAFEKEKDDSGMHKVQGGALS* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2169 539 ProSiteProfiles Myb-like domain profile. 109 160 IPR001005 -
Amo02g2169 539 SUPERFAMILY Homeodomain-like 111 207 IPR009057 -
Amo02g2169 539 MobiDBLite consensus disorder prediction 461 499 - -
Amo02g2169 539 ProSiteProfiles Myb-like domain profile. 161 211 IPR001005 -
Amo02g2169 539 Pfam Myb-like DNA-binding domain 117 175 - -
Amo02g2169 539 Gene3D - 113 165 - -
Amo02g2169 539 CDD SANT 116 160 IPR001005 -
Amo02g2169 539 MobiDBLite consensus disorder prediction 1 58 - -
Amo02g2169 539 CDD SANT 168 211 IPR001005 -
Amo02g2169 539 SUPERFAMILY Homeodomain-like 80 118 IPR009057 -
Amo02g2169 539 MobiDBLite consensus disorder prediction 11 48 - -
Amo02g2169 539 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 109 164 IPR017930 -
Amo02g2169 539 PANTHER MYB-RELATED PROTEIN B-LIKE 18 474 - -
Amo02g2169 539 MobiDBLite consensus disorder prediction 481 496 - -
Amo02g2169 539 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 165 215 IPR017930 -
Amo02g2169 539 PANTHER MYB PROTEIN-RELATED 18 474 - -
Amo02g2169 539 SMART sant 165 213 IPR001005 -
Amo02g2169 539 SMART sant 58 110 IPR001005 -
Amo02g2169 539 SMART sant 113 162 IPR001005 -
Amo02g2169 539 Gene3D - 167 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2169 Amo-Chr2 71340147 71344823 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2169 3 527 MYB Transcription Factor Family AT3G09370 47.166 1.07e-130 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Amo02g2169 Myb_DNA-bind_6 6.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2169 K09422 - gmx:778081 604.364