Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2141 GCCGGGTTAGAAGATTTTTGTGCAGAGCAAGAAGCACCGCTGTACAGTGAAGGAATGAACGTGTTGCATGATTTAGATCCCCAAGAAAGGACACTCGAAGATGTGTCTGATTGCGTTTCCGATTCCGATGAATATTTTGGTGACAATTTCTATGATGACTGGGACAACAGAGCAATTAACGGGATTGCGGACCTCCAAACCGTGAAGTTTAAAGAGCTAACTGCAGATCAGATTCGAAGGCTTCATTTTCCAGATCGATCGGTTGCCTTTTCATTCTACAACTTGTATGCCAAAATGAATGGTTTTTCTGCAAGGAAGAGTCGGATACGACGCAATGTGAATAATGATGTGACACAACAAGCATTTGTGTGCTTTAGACAGGGTTTTAGAGATTTGTGCTCTGATAATGACGCCGCTCGACGCAAACGGGAACCAAGGCCTACAACTAGATGTGGATGTGGGGCAGAGATGCGTGTGCATATACATGAGGAGACAGGCAGATGGATTGTAAGCTACTTTCAAGAAGAACACAACCATGAGATGCTTGATGATATGTTAACTTTTATGCTTCCTAGGCATAGGAAAATGAATTCTGCTGCAATTGATCAGATGAACATGATGCTGAAAGTT 630 0.4286 AGLEDFCAEQEAPLYSEGMNVLHDLDPQERTLEDVSDCVSDSDEYFGDNFYDDWDNRAINGIADLQTVKFKELTADQIRRLHFPDRSVAFSFYNLYAKMNGFSARKSRIRRNVNNDVTQQAFVCFRQGFRDLCSDNDAARRKREPRPTTRCGCGAEMRVHIHEETGRWIVSYFQEEHNHEMLDDMLTFMLPRHRKMNSAAIDQMNMMLKV 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2141 210 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 59 208 - -
Amo02g2141 210 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 59 208 - -
Amo02g2141 210 Pfam FAR1 DNA-binding domain 91 182 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2141 Amo-Chr2 70530388 70531017 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo02g2141 FAR1 1.9e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2141 - - aip:107642023 277.33