Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2112 ATGCATCGCGATCGATTGGTTGGAGAGCAAAATGCTTCTGAGTTGGAAAATGGAATGATCCTCTTCTTATCTCTCTCTGGATTATGCTCTCAGCCCCATACATATACCTCTTCAAAAGCAAAGAAACAGACCCAAATCTCTACACATATTGAAACACTTCTATTCTTTGAAAGCTTATATTTATTTACATTCCAACCATTCGTATTTTTTCTCCTCCAATTCATCTTGATTTGCTCTCATATTCCTCAGGACTCAGAGATGGGAGATAAGAAAAATCCAACAAAAGTTGGTGGAGAAAGCCCAAGAGAAGATGCAACAAGAAGGGTTTTTCCATGCCTATTTTGCTCAAGAACATTTTACAGTTCTCAAGCTTTAGGAGGGCACCAAAATGCTCACAAAAAAGAGAGAACAGCTGCAAGGAGATCCCAAAAATATTCTCAACCTTCTCCAAATCCACCACCTATGGCTTTTGCACCAACACTACACCAACTTGGGGTTTTCAATAGTAACCCTTCAATGTTCATCACTGCCCATGCTGCTAATCTTCATTGTCTTCAAAACAATCAAATACATGAACAGTTTGGATCAAATAATGGTGCACCTAGATTTGGAAACTATCCATTTCTTCAGGGAAGAAGAATTTCAAGCAATAGTAATGGGTTTTCTGATGGTGATGGTGAGAAAGGGTATTGTGGTAAATGGCAAAGTAGCATAAGAAGCAGTAATAGTAATGTTGGGATTAGAAGAGAGAAAGAGCACAAACTTGATTTGTCTCTTCATCTGTAG 786 0.3842 MHRDRLVGEQNASELENGMILFLSLSGLCSQPHTYTSSKAKKQTQISTHIETLLFFESLYLFTFQPFVFFLLQFILICSHIPQDSEMGDKKNPTKVGGESPREDATRRVFPCLFCSRTFYSSQALGGHQNAHKKERTAARRSQKYSQPSPNPPPMAFAPTLHQLGVFNSNPSMFITAHAANLHCLQNNQIHEQFGSNNGAPRFGNYPFLQGRRISSNSNGFSDGDGEKGYCGKWQSSIRSSNSNVGIRREKEHKLDLSLHL* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2112 261 ProSitePatterns Zinc finger C2H2 type domain signature. 112 132 IPR013087 -
Amo02g2112 261 PANTHER PROTEIN LATE FLOWERING 103 261 - -
Amo02g2112 261 Gene3D Classic Zinc Finger 89 152 - -
Amo02g2112 261 MobiDBLite consensus disorder prediction 126 158 - -
Amo02g2112 261 SUPERFAMILY beta-beta-alpha zinc fingers 107 137 IPR036236 -
Amo02g2112 261 PANTHER ZINC FINGER PROTEIN JAGGED 103 261 IPR045320 GO:0003700
Amo02g2112 261 ProSiteProfiles Zinc finger C2H2 type domain profile. 110 137 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2112 Amo-Chr2 69575823 69577118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2112 107 210 C2H2 Transcription Factor Family AT5G25160 42.857 4.17e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2112 - - gmx:100792059 148.673