Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2099 ATGGCTGGAGTTTTGAGGCAAATGTCAATGCCAATGCCAATGCCAATGCCGAGGCAAGCCTTGAGCCACCACCACCAAATGCCGAGGCAATCTCTCAACCACCTTCTTCTTCTCCATCTCTTCTTACTCTTTCTCACACTAACAAACCRTCCTCTTTCTTCTTCCTCTTCAAACAATAATAATAATGAAGCTCTAGCTTTGCTTTCATGGCTCAAAAACGGTTCCTCCAAAACTCCTTCACCACTCTCAGACTGGAACCTTCGAGACCCTACACCATGCAACTGGTCCTGCGTCAAATGCTCCGTAGACAACCACGTCATAGAGATAAACATTCAAGCTATACAGTTAGCCCTTCCTTTTCCTTCAAACCTCTCTTCTTCCCTTCCCTTTCTTCGAAAACTCGTCATCTCCGGTGCCAATCTCACCGGACCTATCTCCCCGGATATCGGATACTTCGCTTCGCTTTCTGTTCTTGATCTCAGCTCAAATGCTCTTGTTGGTTCCATTCCTTCGACCATTGGAAACCTCAAGAACCTTCAAAACTTAACCTTAAACTCAAACCAGCTCACAGGTCCAATCCCAAAGGAGATTGGTGACTGTGTTAGCCTGAAGAATCTCAATGTTTTCGATAATAGCCTCAGCGGCGAGCTTCCAGTTGAGCTTGGAAGCCTTTTGAATCTTGAAACGATAAGAGCTGGAGGGAACAAGGACATTGTTGGGAAGATTCCAGAAGCTATTGGTAACTGCAATAATCTAACCGTTTTAGGCCTTGCAGATACCAAGGTTTCGGGTTCGTTACCTTCTTCGTTGGGAAAACTATCCATGCTTCAAACTATCTCAATTTATAGTACTATGCTTTCCGGTGAGATTCCAGCTGAGATTGGAAACTGTTCTGAGCTTGTGAACTTGTTTCTTTATGAGAACGATCTCTCCGGTTCGATTCCGAAGGAGTTAGGGAAGCTCCAGAAGCTTGAAAAGATGCTGCTATGGCAGAACAGTTTCTTTGGCAGCATACCCAAAGAAATTGGAAACTGCATAAGCTTGAAGATTCTTGATGTCTCCTTGAACTCTCTCTCAGGAACAATACCGCGAAGTTTGGGGAATCTTTCGAACCTCGAAGAGCTTATGCTGAGTAACAACAACATTTCAGGTTCAATTCCTGAAGTCCTTTCAAACTTGACGAACCTTGTTCAGTTGCAGTTAGATACAAATGAGATTTCCGGTTCAATTCCACCGGAGATCGGAAAACTAGAGATGCTTGAAGTTTTTTTTGCATGGCAGAACAAGCTCGAAGGAGCGATTCCTTTGGCGTTAGGCGGTTGTAGAAGCCTTCAAGCTTTGGATTTATCATACAATTCACTCACTGGTGGATTACCTCCAAGTTTGTTTCAGCTTCAGAACTTAACAAAGCTTCTCCTTATCTCGAACCAAATCTCCGGCCAAATTCCAGCAGAGATTGGTAACTGCAGCTCCCTTGTTCGCCTCCGGCTCGTTAAAAACAGAATCACAGGCCAGKTTCCAAGTGAAATTGGATTCCTTAACAACCTCAGCTTCCTTGATCTCTCTGAAAATCATCTTACAGGGTTAGTACCAGAGAATATCGGTAACTGCAAGGAACTTCAAATGCTCAACCTTAGCAATAACTCGCTTTCCGGCGCTTTGCCGAGTTCTTTATCCTCTCTTACAAGGATTGAAGTCATGGATGTCTCGATGAACAATTTCTCCGGCGAGTTTTTGATGAACATTGGCGAACTGGCTTCTCTGCTTAGAATCATTGTTAGGCAAAATTCGTTCTCCGGATCGATTCCCTCTTCGATTGGACGGTGTTCTGGTCTTCAGCTTTTAGACCTTAGCAGCAARAAATTCTCAGGAAGCATACCAGAAGAACTATTCGAAATCGAAGCGCTAGACATTGCTCTTAACTTGAGTCACAATGCATTGTCTGGAATAGTTCCGCCTCAGATTTCGGCTTTGAATAAGTTGTCTATTTTGGACATTTCGCATAATTTGCTTGAAGGAGACTTGTTAGCATTTGCAGGGCTTCAAAATCTTGTTTCTATGAATATCTCATACAATAAATTCTCCGGTTATTTACCGGACAGCAAGCTATTCCGCCAGTTATTGCCGACWGATTTCGAAGGGAATCAAGGCTTGTGTCCCAACGGCCATGATTCTTGCTTCATCAWTAATGCTGCAATGACAACAATGCTGCATAGTACTAATTCCAAGAGGTCACAGAGAATCAAACTCGCAATCGGACTTCTAAGCGCTTTGATTGTTGCATTGGCAATYTTTGGAATCGCGACAATCATTCGAGCGAGGAAAGTTGCTCAAGATGGCAATGATTCTGAGATTGGAGGAAACTCGTTGCCGTGGCACTTTACGCCGTTCCAAAAGCTKAATTTCTCGGTTGATCAAGTCTTGAAGTGTTTGGTAGAGTCCAACATAATTGGAAAGGGATGTTCAGGAGTTGTTTACAAAGCCGAAATGGAAAACGGCGATGTCATCGCTGTGAAGAAGCTCTGGCCAACYACAATGGCTTCAAGATATGACTGCCAAAGTGACAAGCCGGCGAGTAACTGTGGAGTTCGCGATTCCTTCTCGGCCGAGGTGAAGACACTCGGCTCGATTCGCCACAAGAACATAGTGAGGTTCTTGGGCTGCAGCTGGAACAGAAACACAAGATTGCTCATGTATGACTATATGCCTAATGGGAGTCTTGGAAATCTACTCCATGAAAGAAGTAACTGCCTGGAATGGGATATCAGATACCGGATTATACTRGGCGCGGCYCAGGGCTTGGCTTACTTGCATCATGATTGTGTTCCTCCCATTGTTCATAGGGACATCAAGGCCAATAATATCCTCATAGGCCCTGAATTTGAACCATATATAGCTGATTTTGGACTCGCCAAGCTRGTGGATGATGGCGATTTCGCACGATCTTCTAGTACATTGGCTGGTTCCTATGGCTACATTGCTCCTGAGTATGGCTACATGATGAAAATAACAAGAAAAGTGATGTCTTACAGCTATCAACCAATTGATCCAACAATACCAGAAGGAGTCCACATTGTTGATTGGGTGAGACAAAAGAGAGGCGGAAAGGAAGTCCTCGACGAGAGCCTTCGTGTCCGGCCGGAATCCGAACTTGAGGAGATTCTGCAGACATTAGGTGTGGCTTTCTTGTGTGTTAATCCAAGCCCTGATGACAGGCCAACCATGAAAGATGTAGCAGCAATGCTTAAAGAAATTAGGCAAGAAAGAGGAGAGTATATGAAAGTTGACATGATTCTGAATGGATCTTCAGCAAATGATCAACAAGAAGGCAGTATCATTCACACACATACCAATTAG 3357 0.4391 MAGVLRQMSMPMPMPMPRQALSHHHQMPRQSLNHLLLLHLFLLFLTLTNXPLSSSSSNNNNNEALALLSWLKNGSSKTPSPLSDWNLRDPTPCNWSCVKCSVDNHVIEINIQAIQLALPFPSNLSSSLPFLRKLVISGANLTGPISPDIGYFASLSVLDLSSNALVGSIPSTIGNLKNLQNLTLNSNQLTGPIPKEIGDCVSLKNLNVFDNSLSGELPVELGSLLNLETIRAGGNKDIVGKIPEAIGNCNNLTVLGLADTKVSGSLPSSLGKLSMLQTISIYSTMLSGEIPAEIGNCSELVNLFLYENDLSGSIPKELGKLQKLEKMLLWQNSFFGSIPKEIGNCISLKILDVSLNSLSGTIPRSLGNLSNLEELMLSNNNISGSIPEVLSNLTNLVQLQLDTNEISGSIPPEIGKLEMLEVFFAWQNKLEGAIPLALGGCRSLQALDLSYNSLTGGLPPSLFQLQNLTKLLLISNQISGQIPAEIGNCSSLVRLRLVKNRITGQXPSEIGFLNNLSFLDLSENHLTGLVPENIGNCKELQMLNLSNNSLSGALPSSLSSLTRIEVMDVSMNNFSGEFLMNIGELASLLRIIVRQNSFSGSIPSSIGRCSGLQLLDLSSKKFSGSIPEELFEIEALDIALNLSHNALSGIVPPQISALNKLSILDISHNLLEGDLLAFAGLQNLVSMNISYNKFSGYLPDSKLFRQLLPTDFEGNQGLCPNGHDSCFIXNAAMTTMLHSTNSKRSQRIKLAIGLLSALIVALAIFGIATIIRARKVAQDGNDSEIGGNSLPWHFTPFQKLNFSVDQVLKCLVESNIIGKGCSGVVYKAEMENGDVIAVKKLWPTTMASRYDCQSDKPASNCGVRDSFSAEVKTLGSIRHKNIVRFLGCSWNRNTRLLMYDYMPNGSLGNLLHERSNCLEWDIRYRIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPEFEPYIADFGLAKLVDDGDFARSSSTLAGSYGYIAPEYGYMMKITRKVMSYSYQPIDPTIPEGVHIVDWVRQKRGGKEVLDESLRVRPESELEEILQTLGVAFLCVNPSPDDRPTMKDVAAMLKEIRQERGEYMKVDMILNGSSANDQQEGSIIHTHTN* 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2099 1118 ProSitePatterns Protein kinases ATP-binding region signature. 817 840 IPR017441 GO:0005524
Amo02g2099 1118 SUPERFAMILY L domain-like 459 719 - -
Amo02g2099 1118 ProSitePatterns Serine/Threonine protein kinases active-site signature. 945 957 IPR008271 GO:0004672|GO:0006468
Amo02g2099 1118 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 30 1100 - -
Amo02g2099 1118 SUPERFAMILY RNI-like 158 526 - -
Amo02g2099 1118 Pfam Leucine rich repeat N-terminal domain 61 101 IPR013210 -
Amo02g2099 1118 ProSiteProfiles Leucine-rich repeat profile. 371 394 IPR001611 GO:0005515
Amo02g2099 1118 Gene3D Transferase(Phosphotransferase) domain 1 902 1104 - -
Amo02g2099 1118 PRINTS Leucine-rich repeat signature 516 529 - -
Amo02g2099 1118 PRINTS Leucine-rich repeat signature 658 671 - -
Amo02g2099 1118 SMART LRR_typ_2 152 175 IPR003591 -
Amo02g2099 1118 SMART LRR_typ_2 465 489 IPR003591 -
Amo02g2099 1118 SMART LRR_typ_2 513 537 IPR003591 -
Amo02g2099 1118 SMART LRR_typ_2 369 392 IPR003591 -
Amo02g2099 1118 SMART LRR_typ_2 393 417 IPR003591 -
Amo02g2099 1118 SMART LRR_typ_2 176 200 IPR003591 -
Amo02g2099 1118 SMART LRR_typ_2 681 706 IPR003591 -
Amo02g2099 1118 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RCH1 30 1100 - -
Amo02g2099 1118 Pfam Protein kinase domain 813 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g2099 1118 Gene3D Ribonuclease Inhibitor 458 553 IPR032675 -
Amo02g2099 1118 Gene3D Ribonuclease Inhibitor 361 457 IPR032675 -
Amo02g2099 1118 Gene3D Ribonuclease Inhibitor 554 638 IPR032675 -
Amo02g2099 1118 SUPERFAMILY Protein kinase-like (PK-like) 801 1082 IPR011009 -
Amo02g2099 1118 Gene3D Ribonuclease Inhibitor 62 174 IPR032675 -
Amo02g2099 1118 Gene3D Ribonuclease Inhibitor 262 360 IPR032675 -
Amo02g2099 1118 Gene3D Phosphorylase Kinase; domain 1 796 901 - -
Amo02g2099 1118 ProSiteProfiles Protein kinase domain profile. 811 1099 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g2099 1118 Gene3D Ribonuclease Inhibitor 175 261 IPR032675 -
Amo02g2099 1118 SMART serkin_6 811 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g2099 1118 Pfam Leucine Rich Repeat 443 462 IPR001611 GO:0005515
Amo02g2099 1118 Gene3D Ribonuclease Inhibitor 639 726 IPR032675 -
Amo02g2099 1118 Pfam Leucine rich repeat 154 213 IPR001611 GO:0005515
Amo02g2099 1118 Pfam Leucine rich repeat 347 406 IPR001611 GO:0005515
Amo02g2099 1118 Pfam Leucine rich repeat 515 574 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2099 Amo-Chr2 68880442 68884839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2099 61 1109 Receptor kinase-like Gene Family AT5G56040 45.996 0.0 912
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo02g2099 Pkinase 3.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2099 - - gmx:100794698 1590.86