Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2055 ATGAAGTGGTGGGTGTCAATGCCAAAGGTGGAGTTGCATACTCATCTCAATGGATCCATTAGAGACTCCACACTGCTCATCCATAAGCAGGCTTCTAGTGCATCTGGCAAAGCAGTGTCTGGTGGCATGTCCAGTGATGAAAAAAAATCAGTCTTGATTGCAATGCGGAGGGGTGATAACTTAAGGGCTGAGGATTATATGCTTTTTGACCCTTTCATATATCATGGGATGGCTGAACTGCATGACAGGCACAGAGAAATGCGCCTTGGTGTTGATAACACGTCTTATGAGGAATTGTTGGCATTGGAGGAGCGAATTGGAGATGTCAGCACTGGATTGAGCGAGGATGTCATTATGAAGTCGATGAAACAGCAAATATACATGTCTGTTATGGCGGAGTCTTCTACAGATCTTGAACCTTGTTGTATCTGTCAGGTAAAAGTTATGGTCTCAGCTAATTAA 462 0.4372 MKWWVSMPKVELHTHLNGSIRDSTLLIHKQASSASGKAVSGGMSSDEKKSVLIAMRRGDNLRAEDYMLFDPFIYHGMAELHDRHREMRLGVDNTSYEELLALEERIGDVSTGLSEDVIMKSMKQQIYMSVMAESSTDLEPCCICQVKVMVSAN* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2055 153 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 54 146 - -
Amo02g2055 153 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 54 146 IPR045191 GO:0061630
Amo02g2055 153 SUPERFAMILY Metallo-dependent hydrolases 4 101 IPR032466 -
Amo02g2055 153 Gene3D - 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2055 Amo-Chr2 67504856 67506929 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2055 5 145 C3H Transcription Factor Family AT2G15530 50.980 2.33e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2055 - K19041 ahf:112747303 242.662