Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2024 ATGGGTTTTCTAAGTCATCAAACTCATGCTAATTCCTTCTTGTTTATTACTACTTTGTTCATATTTGTTAGCATCCATTTGTGTTTGAGCTCTATGAATGACACAATCACATCAAACACATCCATTGAAGACAATCACACAATAACCTCAAACAACACTAACTTCAAGCTCGGATTCTTCAGCCCTCCAAACTCAACCAATCGCTACGCTGCAATATGGTACCTCTCTGACTCCTACATCATATGGATAGCAAACAGAGATCAAGCCGTGAAAGATTCTTCAGGGGTTATCAAGATTCACAAGGATGGCAACCTCGTAGTAATGGACGGAAGAAACTATATAGTTTGGTCAACAAACCTCACATTCTCAACTAAATATGTAACCAATATCTCAAGTGCTCAGCTTCAAGATAACGGTAACCTTGTTCTTAGGGATGGTAAAACTGGAGAAACGGTTTGGGACAGTTTCACGCACCCTGCAGATGCAGCCATGCCAAGGATGAAAATCACGGCGAACAAGATCACAGGCAAGAAAATGGAGTATGTTTCTTGGAAATCCCCTACAGATCCTTCTTCTGGAGACTACTCCGTGAGCATGGAGCGGTTGGCCGCTCCGGAACTTTTCTTATGGTACAAGAAAAGTAGGCCGTATTACCGAACCGGTCCGTGGAACGGTCGGACTTTCCTCGGCTCTCCGAGGATGCTAACAGAGTATCTCTATGGGTGGCGTCTGGACCACGATCCAGATGGAACCAATTATCTAACGTATAATTTCGCTGATCCAGATGCATTTGCTATTGTCTGGATTACTTATGATGGAAAACTTAGGATGGCAAAATTCTTGAACCAGAAGAATTACTACACGATTGATATTTTTCCAAAAGACTGTGATTATTACGGCGCTTGTGGGCCTTTCGGAAACTGTGATCCAAATAGCATACCGATTTGTAGCTGTTTCGAAGGGTTTGAGCCAAGGAATGTGCACGAATGGAGTAAGAAAAATTGGTCTAGTGGTTGTGTGAGGAAGAAAGAGGCACAGCTTCAGTGTGATAGGTTGAAGAATTTGAACAATAATAGTCATAATGGAGTTGATGAAGTGCAACAAGATGGGTTTAAGGTGTTTAATAATATGAAAGTGCCGGATTTCGCTGAGAGATCTGATGATGACGTAGACAATTGCAGAACGAGTTGTTTGGCAAATTGTTCTTGTTTGGCTTATGCTTATGATTCTTATATTGGATGCATGTTTTGGATTAGAGACTTGATTGATTTGGAACAATTCTCAATTGGTGGAGTTGATCTCTTCCTTCGTGTCCCTCATTCTCAACTTGTAAGTAACAACTTATTAATCCACTCCATATTAAGAACTCTGTCTCAAAAAAAGACTACTGTTGGAGAACAAAATCAAATGAAACTCGACGAACTACCGTTGTTCGAATTTGAAAAGCTTGCAACTGCTACAAACAACTTTCATGCTGAAAACATGCTTGGGAAAGGAGGTTTTGGTCCGGTATATAAGGGCCATTTGGAAGATGGACAAGAAATTGCAGTGAAAAGATTGTCCAAAGCGTCTGGACAAGGGCTGGAAGAATTTATGAATGAAGTAGTGGTTATTTCGAAACTTCAACATCGCAATCTTGTTAGACTTCTTGGTTGTTGCGTCGAACCTGGCGAACAAATGTTGGTCTATGAGTTCATGCCAAACAAAAGTTTGGACGCCTTTCTCTTTGATCCACAACGAAGAAAAGTCTTAGATTGGAAAAAACGTTTCAACATAATTGAAGGGATAGCTCGTGGTATACTTTATCTTCACAGAGATTCAAGACTTAGAATCATACACAGAGATCTCAAAGCAAGCAATATCTTGTTGGATGATGCAATGAATCCAAAAATATCAGATTTTGGTTTAGCTAGAATTTTTAGAGGAGATGAAGATGACGAAGCTAGTACAAAAAAAGTTATTGGAACATACGGTTACATGCCACCTGAATATGCAATGGAAGGATTATTTTCAGAAAAATCAGATGTCTATAGCTTTGGTGTTTTGTTATTAGAGATTGTCAGTGGACGAAGAAACACCAGCTTTTATAACCATCGGCAATCACTAAGCCTTGTGGGATATGCATGGAAACTATGGAATGAAAATAACATCATATCATTAATAGATCCAGAGATTATGGATCCATGCTTTGAGAAAAGTATTTTGAGGTGCATACACATAGGACTTTTATGTGTGCAAGAATTGACAAAAGAGCGACCAACTATATCCACTGTGGTTTTGATGTTAATAAGTGAGATTACACATCTTCCTCCACCAGGACAAGTTGCATTTGTCCACAAACAAAATCTTTACAGTTCAGAATCCTCTCACAAAAGTCACCCATCCACCAGATCAAACAACAATTTAACTCTTTCTGAAATAGAAGGAAGATAA 2433 0.3933 MGFLSHQTHANSFLFITTLFIFVSIHLCLSSMNDTITSNTSIEDNHTITSNNTNFKLGFFSPPNSTNRYAAIWYLSDSYIIWIANRDQAVKDSSGVIKIHKDGNLVVMDGRNYIVWSTNLTFSTKYVTNISSAQLQDNGNLVLRDGKTGETVWDSFTHPADAAMPRMKITANKITGKKMEYVSWKSPTDPSSGDYSVSMERLAAPELFLWYKKSRPYYRTGPWNGRTFLGSPRMLTEYLYGWRLDHDPDGTNYLTYNFADPDAFAIVWITYDGKLRMAKFLNQKNYYTIDIFPKDCDYYGACGPFGNCDPNSIPICSCFEGFEPRNVHEWSKKNWSSGCVRKKEAQLQCDRLKNLNNNSHNGVDEVQQDGFKVFNNMKVPDFAERSDDDVDNCRTSCLANCSCLAYAYDSYIGCMFWIRDLIDLEQFSIGGVDLFLRVPHSQLVSNNLLIHSILRTLSQKKTTVGEQNQMKLDELPLFEFEKLATATNNFHAENMLGKGGFGPVYKGHLEDGQEIAVKRLSKASGQGLEEFMNEVVVISKLQHRNLVRLLGCCVEPGEQMLVYEFMPNKSLDAFLFDPQRRKVLDWKKRFNIIEGIARGILYLHRDSRLRIIHRDLKASNILLDDAMNPKISDFGLARIFRGDEDDEASTKKVIGTYGYMPPEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNTSFYNHRQSLSLVGYAWKLWNENNIISLIDPEIMDPCFEKSILRCIHIGLLCVQELTKERPTISTVVLMLISEITHLPPPGQVAFVHKQNLYSSESSHKSHPSTRSNNNLTLSEIEGR* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2024 810 Pfam PAN-like domain 367 424 IPR003609 -
Amo02g2024 810 Gene3D Phosphorylase Kinase; domain 1 464 565 - -
Amo02g2024 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 190 IPR036426 -
Amo02g2024 810 ProSiteProfiles Bulb-type lectin domain profile. 33 156 IPR001480 -
Amo02g2024 810 Pfam Protein tyrosine and serine/threonine kinase 492 759 IPR001245 GO:0004672|GO:0006468
Amo02g2024 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Amo02g2024 810 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 461 808 - -
Amo02g2024 810 PIRSF SRK 5 462 IPR024171 GO:0004674
Amo02g2024 810 PIRSF SRK 449 810 IPR024171 GO:0004674
Amo02g2024 810 SUPERFAMILY Protein kinase-like (PK-like) 475 782 IPR011009 -
Amo02g2024 810 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 461 808 - -
Amo02g2024 810 Gene3D Transferase(Phosphotransferase) domain 1 566 768 - -
Amo02g2024 810 Pfam S-locus glycoprotein domain 218 325 IPR000858 GO:0048544
Amo02g2024 810 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 442 - -
Amo02g2024 810 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 22 442 - -
Amo02g2024 810 MobiDBLite consensus disorder prediction 786 810 - -
Amo02g2024 810 Gene3D - 28 158 IPR036426 -
Amo02g2024 810 ProSiteProfiles PAN/Apple domain profile. 366 439 IPR003609 -
Amo02g2024 810 SMART blect_4 33 159 IPR001480 -
Amo02g2024 810 Pfam D-mannose binding lectin 80 185 IPR001480 -
Amo02g2024 810 ProSiteProfiles Protein kinase domain profile. 490 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g2024 810 CDD PAN_AP_plant 367 439 - -
Amo02g2024 810 CDD STKc_IRAK 496 762 - -
Amo02g2024 810 SMART ntp_6 366 438 IPR003609 -
Amo02g2024 810 SMART serkin_6 490 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g2024 810 CDD B_lectin 41 159 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2024 Amo-Chr2 66546973 66551376 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2024 478 777 Receptor kinase-like Gene Family AT4G23230 59.667 2.58e-122 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo02g2024 PK_Tyr_Ser-Thr 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2024 - - gmx:100786846 1127.85