Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2005 ATGGCTGAGTCAACGGCGAACACGCAGAGCAGCAGCAACAACAACCATGGGACCGAAGAACAGGAGGATGACTACATGGGTGACCTCTCACGCTTCCTTCCATCTGAGCCTCTTCCAAAACCTTCATCCAAGAAGATCTCTGGCAAGAAAGACCCTCCGATCAGCTCTTCCAAGARTAAGTTAAAAACACTCAGCTGGCAAGAACGGCGAAAACTTGAAAGAGAAAGAAARCAGAAAGAAGAGGATGAGCAAACATTGGCAAAAGTGGAAGCTCCAATACCACAATCCAACATTGGGTTTAAGCTGCTCAAACAAATGGGTTATACGCCCGGTGCTGCCCTTGGCAAAGAGGGTTTGGGTAGGGCTGAGCCAGTGGGGATTGAGATTCGACGATCGCGAGCTGGTATTGGCYTAGATGATCCTCACAAGGAGAAGAGGAAAAAGGAGGAAATCATMGCTGAGAGAAAAAGGAGGAAAGAGGAGGATCTAATGCAAGACTTTGGGTTGAGACAGAAGTCGCGATGGCAGAGTAAGAGAGTTGTAGCCAATTTCCATAAGGCAAAGGTTGCCCTTGATCAATTAGAGAATAGAGAAATCATTGAACCGGAAAAGAATGAGGATGATGAAGAARAGGAAGATGAGGAAGAGGAAGAAATAACGGAAGAGGATTTGCAAGAAGTTTTGATGAAACTGAGGGATGACCACAATTATTGCCTCTTTTGTGGATGCAAGTATGAATCAAAGGATGCTCTCTTGACCAACTGCCCTGGAACCAATGAAGATGATCACTAA 792 0.452 MAESTANTQSSSNNNHGTEEQEDDYMGDLSRFLPSEPLPKPSSKKISGKKDPPISSSKXKLKTLSWQERRKLERERKQKEEDEQTLAKVEAPIPQSNIGFKLLKQMGYTPGAALGKEGLGRAEPVGIEIRRSRAGIGLDDPHKEKRKKEEIIAERKRRKEEDLMQDFGLRQKSRWQSKRVVANFHKAKVALDQLENREIIEPEKNEDDEEXEDEEEEEITEEDLQEVLMKLRDDHNYCLFCGCKYESKDALLTNCPGTNEDDH* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2005 263 Coils Coil 69 89 - -
Amo02g2005 263 Coils Coil 205 210 - -
Amo02g2005 263 MobiDBLite consensus disorder prediction 133 157 - -
Amo02g2005 263 MobiDBLite consensus disorder prediction 1 16 - -
Amo02g2005 263 ProSiteProfiles G-patch domain profile. 95 141 IPR000467 GO:0003676
Amo02g2005 263 SMART DUF4187_2 208 263 IPR025239 -
Amo02g2005 263 MobiDBLite consensus disorder prediction 202 223 - -
Amo02g2005 263 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 11 21 263 - -
Amo02g2005 263 PANTHER UNCHARACTERIZED 21 263 IPR039249 -
Amo02g2005 263 Pfam Domain of unknown function (DUF4187) 211 263 IPR025239 -
Amo02g2005 263 MobiDBLite consensus disorder prediction 63 87 - -
Amo02g2005 263 Coils Coil 212 234 - -
Amo02g2005 263 MobiDBLite consensus disorder prediction 1 91 - -
Amo02g2005 263 SMART G-patch_5 93 139 IPR000467 GO:0003676
Amo02g2005 263 Pfam G-patch domain 95 138 IPR000467 GO:0003676
Amo02g2005 263 MobiDBLite consensus disorder prediction 196 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2005 Amo-Chr2 65880900 65883703 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2005 87 137 C2H2 Transcription Factor Family AT5G26610 43.137 2.92e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2005 - - adu:107490107 340.117