Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1991 ATGGTAATCTGTGAGATCTTCTTCATGCAATGCAAGAAGAAGAAGTTCAATTGGGATATGCATCTAAAGATAGCGCTTGGAGCAGCACAAAGGCTTGCCTATCTACATTACGATTGTAGTCCTCGGATCATCCACAGGAATGTGAAATTATCAAACATTTTGCTGGATGGAGACTTTGAGCCCCATCTCACTAATTTTGGCATAGCCAAAGTTCTTTGCCCCTCAAAGTCGCATACTTCGACTTACATAATGGGCACAATTGGCTACATAGACCTTGAGTATGCTAGAACCTCCTGA 297 0.4209 MVICEIFFMQCKKKKFNWDMHLKIALGAAQRLAYLHYDCSPRIIHRNVKLSNILLDGDFEPHLTNFGIAKVLCPSKSHTSTYIMGTIGYIDLEYARTS* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1991 98 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA 6 98 - -
Amo02g1991 98 SUPERFAMILY Protein kinase-like (PK-like) 12 98 IPR011009 -
Amo02g1991 98 ProSiteProfiles Protein kinase domain profile. 1 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g1991 98 Pfam Protein kinase domain 12 90 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g1991 98 Gene3D Transferase(Phosphotransferase) domain 1 7 98 - -
Amo02g1991 98 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1991 Amo-Chr2 65491458 65491841 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1991 12 98 Receptor kinase-like Gene Family AT5G62230 68.966 6.42e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Amo02g1991 Pkinase 3.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1991 K20718 - gmx:100305428 153.68