Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1990 ATGGCCGTTGCTTTTGATTTCCAAGGTTACATCCAACTTTTCCTCATCTGGCTTATCTCCACCATTATTGTTCGAGTCATTCTCACAAGAAACCGCAAGAAAAACGGTCACCAAAACTTACTACCAAGTCCACCATCACTACCTATCATCGGACACCTTCACTTAATCTCTTCATTACCACACCAAAGCTTCCACAGCCTCTCATCCCGGTATGGATCCATCATGCAAATCTACCTCGGCTCACTCCCTTGTGTGGTGGTCACCACCCCGGAAATCGCGAAAGAGTTCCTCAAAACACACGAAACTACCTTCATCAATCGTTTCAAAAGCTCTGCCGTTCATTACTTGTCTTACGGCTCAAAGGGTTTCTTGTTTGCGCCTTATGGAAGCTTCTGGAAGTTCATGAAGAAGCTCTGCATGTCAGAGCTTCTCGGTCAACGAACACTCGACCAGCTTCTCCTTTTGAGAAAGCAGGAGACTCTGAGATTCCTCAGAGTCTTACAGAAAAAGGGAGAAGCTGGCGAGGCCATGGATGTTGGTGCCGAGCTTTTGTCTCTCACCAACAGCGTAATTTCGAGAATGACCATGAGCGTGACTTGTTGCGAGGAAGGTGGGAACGGTGATGATGCAGAAGTTATGAGGAAGATGGTGAAAGACACTGCTGAGCTTGCTGGAAAGTTTAATGTTTCGGATTTTATTTGGTTGTTTAAGAATTGGGACTTGCAAGGGATGAATAAGAGGCTTAAGGGGATTTTGGATAGGTTTGATTCGATGATAGAGAGGGTAATAAAGGAGCATGAATTGGCAAGGAAGAAAAGGAAAGAAGAAGGAGAAAGTGATGAACGTGGAAGAGTGAGGGACTTGCTTGATATTTTGCTGGAAATATATGAAGATAAGAGGAATGACGAGATAGAATTGAGCAGAGAAAATATCAAAGCTTTCATATTGGACTTATTCATGGCAGGAACAGACACCTCAGCTATCACCATTGAATGGGCTTTTGCTGAGTTAATCAACAACCCACATGTAATGAAAAAAGCAAGACAAGAGATTGATTCAGTAACAAGAAGAAACAGAATAATAGAAGAATCAGATCTTCCAAACCTTCCTTACTTGCGAGCCATAGTTAAAGAAACACTAAGGCTTCATCCTCCGGCACCACTTTTAGGGAGGCAATCAACTGAAATCTCTAATGTTTGCGGCTATGAAATTCCATCAAAGTCCTTATTGTTTATTAACCTGTGGTCTATGGGTAGGGACCCTAAGATTTGGGAGAACCCTCTGGAGTTTAGGCCAGAGAGGTTCATTGAAGAAAGACAATTGGATGTCAGGGGGCAATATTTTCAACTAATGCCATTTGGAACTGGAAGAAGAGTGTGCCCTGGAGCTTCACTAGCACTTCAAATTGTGCCTAGTAATCTTGCTGCCATGATTCAGTGTTTTGAATGGAAGGTTGATGGGGTTGTTAGTATGGAAGAGAAACCTGGCATGACAGTTCCAAGAGCTCATCCTTTAATTTGTGTCCCTGTGCCTCGCTTTAATGTCCTTCCTTCTATTGATTCTGTGTAG 1569 0.4308 MAVAFDFQGYIQLFLIWLISTIIVRVILTRNRKKNGHQNLLPSPPSLPIIGHLHLISSLPHQSFHSLSSRYGSIMQIYLGSLPCVVVTTPEIAKEFLKTHETTFINRFKSSAVHYLSYGSKGFLFAPYGSFWKFMKKLCMSELLGQRTLDQLLLLRKQETLRFLRVLQKKGEAGEAMDVGAELLSLTNSVISRMTMSVTCCEEGGNGDDAEVMRKMVKDTAELAGKFNVSDFIWLFKNWDLQGMNKRLKGILDRFDSMIERVIKEHELARKKRKEEGESDERGRVRDLLDILLEIYEDKRNDEIELSRENIKAFILDLFMAGTDTSAITIEWAFAELINNPHVMKKARQEIDSVTRRNRIIEESDLPNLPYLRAIVKETLRLHPPAPLLGRQSTEISNVCGYEIPSKSLLFINLWSMGRDPKIWENPLEFRPERFIEERQLDVRGQYFQLMPFGTGRRVCPGASLALQIVPSNLAAMIQCFEWKVDGVVSMEEKPGMTVPRAHPLICVPVPRFNVLPSIDSV* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1990 522 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 517 - -
Amo02g1990 522 Pfam Cytochrome P450 42 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1990 522 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1990 522 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1990 522 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1990 522 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1990 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Amo02g1990 522 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1990 522 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1990 522 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1990 522 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1990 522 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1990 522 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1990 522 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1990 522 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1990 522 SUPERFAMILY Cytochrome P450 38 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1990 522 Coils Coil 344 364 - -
Amo02g1990 522 Gene3D Cytochrome P450 25 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1990 522 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1990 Amo-Chr2 65482396 65486288 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1990 6 512 Cytochrome P450 AT5G06900 47.337 2.83e-167 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1990 K24188 - gmx:100805931 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g1820 12 87023386 87025663 Amo02g1990 02 65482396 65486288 hybridization
Amo16g0154 16 2035127 2037184 Amo02g1990 02 65482396 65486288 PCT
Amo02g1990 02 65482396 65486288 Amo16g0157 16 2092713 2095435 PCT