Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1984 ATGAACATGGCTTCCTCAACCTTAATGTTATTCCTTCTAGTCTTGTATTTTTCATTTCAATTCTCATCTTCTTTAGATGCACTGAACAAAGGCCACTCCTCTCTCTCAGTGGAGAAAGCTGAAAAAGACGTCATTGTTTCAGAAAATGGCATGTTCTCCGCCGGCTTCTTCGAAGTCGGTGATAATGCCTTCTCCTTTGCAATATGGTTCACCACAACGGCTACCGTTGCTTGGATGGCAAATCGCGACAAACCCGTGAATGGAAAGCGCTCAACGCTTTCTCTCTCTCGCACCGGTAATCTTATTTTGGTAGATGCAGGTCAGTTCCAAATATGGTCTTCTGAGACGGAGTCAACTCTTCCAACCGAGTTACGTCTTGGAGATAATGGAAATCTTGTTCTACGAGAGTTGCAGGGAGGACGTGTTCTGTGGCAAAGTTTTGATTTCCCAACGGACACTCTTCTTCCCGGACAACGTCTTACCAGAAGAACACAATTAGTTTCTTCAAGAACAGAGAGTAGCCATTCCTCTGGTTTCTATATGTTGTCCTTTGATGATAGAAACGTTCTTAACCTTCTTTACGAGGGCCCTGACGTGTCAAGCTCTTATTGGCCCGATCCTGATCTCACAGTTTGGAGCGCTGGAAGGTTTATTTACAATAATAACAGAATTGCGGTACTAAATTCTCTTGGAGATTTTAATTCAACGGATAAATATAATGCAAGAACATCTGATTATGGCGTGGTGCTGCCTAGAAAGTTGACAATCGATCATGATGGAAATCTTCGAGTGTACAGTCAAGATCTATCACAAAAATGGTACGTGTCATGGCAAGCCATTTCTGATGGTTGCATCATTCATGGGATCTGTGGTGCTAATAGTGTTTGCAGATTTGATCCTCAAAATGGAAGGAAGTGCTCATGTGTTCCTGGGTACAAAGTAAAGAATCAAAGTGATTGGTCTTATGGGTGTGAATCCACATTTGATGCTACGTGTGATGGAAGATTTCAGCATTCATATGACAAGGATGTGGGCTACTTCAGGTGCTATACAAAATGGAAATTACTCAACGGCCATTTGCCAGCAGATGCAGGAAAACTAACCTACTTGAAAGTACCCAAAAGGAAGAGCTTCCCCAACAGCTATGGAGACACTGCCATCAGAAACAATGGTTGTTCTGTGAAAATTCATAGAGAGTATTTGAAGAAAAATGTAAGCCGTTTTGTGAGCTTCCTTTTGTGGTTTGCCACTGCAATTGGAGTTCTTGAAGTGGCTTGCGTTTTGGTTGTTTTGTTCTTAATCAGACGCCGGCATAATTCTCGCATAGATCCACATGGCCGTCATCTCGGAACAGTGGGATTCAGAAAATTTAGTTATTCGGAGCTAAAAAAGGCAACAAAAGGATTTAGCCAAGAGATTGGAAGGGGTGCAGGAGGCATTGTATACAAAGCTCTATTGTCGGATCAAAGAATTGCTGCTGTAAAGAAACTCAATGATGCTAAGCAAGGAGAAGGTGAATTCCTTGCTGAAGTGAGCATCATTGGGAGGCTCAACCACATGAACTTGATTGAAATGTGGGGTTATTGCGCTGAGGGAAAGCATCGGCTTTTGGTGTACGAGTACATGGAAAATGGTTCTTTGGCAGATAACCTCTCATCCAATACACTTGATTGGAGCAAGAGGTATAACGTCGCTCTCGGAACAGCAAGAGGTTTGGCATATTTACATGAAGAATGCTTGGAATGGATTTTGCACTGTGATATAAAACCCCAAAATATTCTCTTGGATTCAAATTATCAACCCAAGGTTGCAGATTTCGGATTGTCCAAGTTATTGAACAGAGATGTTCTCAACAATAATCCAAATTTCTCAATGATAAGAGGAACCAGAGGGTATATGGCGCCTGAGTGGGTTTTCAACCTAGCAGTTACTTCCAAAGTGGATGTTTATAGCTATGGAATTGTTCTCTTGGAGATGATAACCGGAAAGAATCCGGCAGCAGATATTCAAGCAATTAATGGAGAAGAACCGTACAATGGGAGGCTAGTAACATGGGTGAGAGAGAAAAGGAGAGAATGTGCATCTTGTGTGGAGCAAATCATGGATTCTACAATAGTGTCAAATTATGATGAAAATAAGATGGAAGTTTTGGCTAGAGTGGCATTGGAGTGCATAGAAGACGACAAAGAAGAAAGGCCTACCATGAGCCAAGTCGTTGAAATGCTTCAAAGCCAAGATTATGATCCTAATAATGGTGGAGCATAA 2265 0.4181 MNMASSTLMLFLLVLYFSFQFSSSLDALNKGHSSLSVEKAEKDVIVSENGMFSAGFFEVGDNAFSFAIWFTTTATVAWMANRDKPVNGKRSTLSLSRTGNLILVDAGQFQIWSSETESTLPTELRLGDNGNLVLRELQGGRVLWQSFDFPTDTLLPGQRLTRRTQLVSSRTESSHSSGFYMLSFDDRNVLNLLYEGPDVSSSYWPDPDLTVWSAGRFIYNNNRIAVLNSLGDFNSTDKYNARTSDYGVVLPRKLTIDHDGNLRVYSQDLSQKWYVSWQAISDGCIIHGICGANSVCRFDPQNGRKCSCVPGYKVKNQSDWSYGCESTFDATCDGRFQHSYDKDVGYFRCYTKWKLLNGHLPADAGKLTYLKVPKRKSFPNSYGDTAIRNNGCSVKIHREYLKKNVSRFVSFLLWFATAIGVLEVACVLVVLFLIRRRHNSRIDPHGRHLGTVGFRKFSYSELKKATKGFSQEIGRGAGGIVYKALLSDQRIAAVKKLNDAKQGEGEFLAEVSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLADNLSSNTLDWSKRYNVALGTARGLAYLHEECLEWILHCDIKPQNILLDSNYQPKVADFGLSKLLNRDVLNNNPNFSMIRGTRGYMAPEWVFNLAVTSKVDVYSYGIVLLEMITGKNPAADIQAINGEEPYNGRLVTWVREKRRECASCVEQIMDSTIVSNYDENKMEVLARVALECIEDDKEERPTMSQVVEMLQSQDYDPNNGGA* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1984 754 CDD B_lectin 45 150 IPR001480 -
Amo02g1984 754 Pfam S-locus glycoprotein domain 252 315 IPR000858 GO:0048544
Amo02g1984 754 Gene3D - 34 148 IPR036426 -
Amo02g1984 754 PIRSF SRK 363 751 IPR024171 GO:0004674
Amo02g1984 754 PIRSF SRK 1 357 IPR024171 GO:0004674
Amo02g1984 754 SUPERFAMILY Protein kinase-like (PK-like) 443 747 IPR011009 -
Amo02g1984 754 Pfam Protein kinase domain 470 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g1984 754 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 207 IPR036426 -
Amo02g1984 754 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 7 332 - -
Amo02g1984 754 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 331 746 - -
Amo02g1984 754 Gene3D Phosphorylase Kinase; domain 1 436 541 - -
Amo02g1984 754 Pfam D-mannose binding lectin 75 167 IPR001480 -
Amo02g1984 754 SMART blect_4 36 150 IPR001480 -
Amo02g1984 754 ProSiteProfiles Bulb-type lectin domain profile. 30 147 IPR001480 -
Amo02g1984 754 CDD STKc_IRAK 473 743 - -
Amo02g1984 754 Gene3D Transferase(Phosphotransferase) domain 1 542 751 - -
Amo02g1984 754 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 7 332 - -
Amo02g1984 754 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 331 746 - -
Amo02g1984 754 ProSiteProfiles Protein kinase domain profile. 467 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g1984 754 ProSitePatterns Protein kinases ATP-binding region signature. 473 496 IPR017441 GO:0005524
Amo02g1984 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 583 595 IPR008271 GO:0004672|GO:0006468
Amo02g1984 754 ProSiteProfiles EGF-like domain profile. 280 318 IPR000742 -
Amo02g1984 754 SMART serkin_6 467 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1984 Amo-Chr2 65369731 65372115 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1984 457 744 Trihelix Transcription Factor Family AT5G38560 41.892 1.31e-63 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Amo02g1984 Pkinase 1.8e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1984 - - aip:107625486 1308.51