Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1982 GTTTCATATCCTCACCATATCTCTTCTCTCTTGCGGTGGTCCTTCCCAACAAAGAAGGCTCACTTCCCAGCCCACCTACAACCCACGCTGCCTCTCTGTTCCAACGTCCGGCAGCCTCCCAAGTGGAGAAAATTTTTTTTCACTACACCCGTCAACCCGTGCATCGTGCAGTCCGGCGTCGGTCACTGTGATCACGCCCTGTGCAGCCCCTGCAGCCCAAGGCCTCCACCATTGCAACCCCTGCAGCCCAAGTTGTCTCGTGCCAGTTTTTTTACCGGTGATTCGTTCGACGGAGAAAGTGAACAGTTGTACAAGGCCATAGAATGTACGGAAATTACTGAGTTGGAATGTGATGACACGGAACTTGTTGATGAGTTACCAGACTATAGTTGCCTTGCTGACGATGAAATACCAAAAGTTAGGATGCGGTTTGAGCATTTGAAGTTGGCCCAGGATTTTTATGCGACCTATGCAAAAAAGATGACAAAGCAACCGATCAACCAATCTATCCATTGCAATCGGGAGGGTTTCTGGGCGTCTCGTTTCAAGGCACCCATACGGAAGAACACTATGACAGGTGTGGGATGCAGAGCAAGAATATATGCAAAGTTCGATAGGGAAAAGCATGATTGGGTCTTGTTAAAGGTTGAACTAAATCACTCGCACCCATGTTCAACTAGGAAGGCGGCGCACTACCACGAGAACAGGGAGTTAACAATGCATGCGAAGTGTATCATTGAGATTAATGATGAGGCGGGCATTCGACCCAACAATACCTTTCTAGCATTAGCCAATGAGTTTGTTCACGAGTTCGACAATGTCCTAGGAACGAAAGGGCAGAAGGAACTGGAGGACGATGTTGCAGACTCGAGAGGTCTAATCCCATGTTCAACTAGATCAATGTTTAGGGATGTCCAAACCGAGTTTGGTAAGAAGGTTGATTGCACTATTCGTGCCGTGGATGAACAGGGCAACTCCGCTAGGGTAAAAGTGAAAGAGGAAATACTAGTCTATGAGACGACTCGATATGTTACATTTGACATCCATTTTGATCGTTCAACACACAAGGAATTCATGAACTGTGATGATGAGGCAGACATGCTGCACAATGTTCTGGAGGATGCAAGGGCCAAGCTAGTAGATTACCGTGGCAAGATGCAAAATAACACTGTCACTACTGCACACAATAGCATCATCACATGCCCTTCAACCGTTTTCGTCACAGAGGACATTCAGGCCCCATCAAAGGTAACCACTAAGGGTCGTCCAAAAGGCAAAAGGTTAGGATATGAGTTGGATAAATCAAATCAGAAAATCCATGCAGAGAAAGCGGAAGAGTGTACGCAAGCTTGTTTGTTTCAGGATAATCGTGTAGAATCTGGTGCAAATCAAGCTTCGGAGGCTTCTACTCAGCAGATTGCTAAGCAAGGACTTGGTGGATTCATGTCGCTGTTCAACTCCTTCGACAATACCTAG 1476 0.4661 VSYPHHISSLLRWSFPTKKAHFPAHLQPTLPLCSNVRQPPKWRKFFFTTPVNPCIVQSGVGHCDHALCSPCSPRPPPLQPLQPKLSRASFFTGDSFDGESEQLYKAIECTEITELECDDTELVDELPDYSCLADDEIPKVRMRFEHLKLAQDFYATYAKKMTKQPINQSIHCNREGFWASRFKAPIRKNTMTGVGCRARIYAKFDREKHDWVLLKVELNHSHPCSTRKAAHYHENRELTMHAKCIIEINDEAGIRPNNTFLALANEFVHEFDNVLGTKGQKELEDDVADSRGLIPCSTRSMFRDVQTEFGKKVDCTIRAVDEQGNSARVKVKEEILVYETTRYVTFDIHFDRSTHKEFMNCDDEADMLHNVLEDARAKLVDYRGKMQNNTVTTAHNSIITCPSTVFVTEDIQAPSKVTTKGRPKGKRLGYELDKSNQKIHAEKAEECTQACLFQDNRVESGANQASEASTQQIAKQGLGGFMSLFNSFDNT* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1982 491 Pfam FAR1 DNA-binding domain 158 225 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1982 Amo-Chr2 65347141 65363925 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo02g1982 FAR1 5.9e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1982 - - aip:107627581 325.865