Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1980 ATGGCTGATTTTGGTACCTATTCCCTATTACTTCTCATTTGGGTAGCCTCAACCTTGTTTCTAAGAGTAATCTTCAGCAAACATGGCATAAATAACGGGTCACGAAACCTTCCACGAAGCCCTATAGCCCTTCCAATCATAGGACATCTCTACCTTCTAAGGAAGCTTCCTCACCAATCATTTCATAAGATCTCGACACGTTATGGCCCTTTGGTTTATCTCTTGTTTGGTTCAAAGGCTTGTGTCCTTGTTTCTTCACCTGAAATGGCAAGGCAATGCCTCAAAACCCATGAAACATGCTTCTTGAACCGACCTAAGAGGACCAACCTTGATTACATCACATATGGTTCCTCGGATTTTGTTTTGGCACCTTATGGACCTTATTGGAGGTTCATGAAGAAGCTTTGTATGACTGAACTCCTTGGTGGCCGTATACTCCAACAGCACCTTCCCATCAGAGCTCAGGAAATAAGGCTATTCTTGACAGGTATGATGAAAAAGGCAGAGATGAGAGAAGAGGTGAATGTTGGGTCAGAGCTAGCTATGGTTGCAAACAACATAATCACAAGGATGGCTTTGAGAAGGAGGTGTTGTGATGTTGGAGGTGAAGGCCACCAACTCATTGAGCTTGTGAAGGAGATGACTGAGCTTGGTGGCAAGTTCAACTTGGGAGACATGTTCTGGTTTGTGAAGATGTTTGATTTGCAAGGGTTTGGAAAGAGGCTTGAGAGTGTTAGGAGTAGGTATGATGCTATAATGGAGAGGATCATGAAGGAGCATCAAGATGCAAGAAGGAATAGAAAGACTATTGGAGATGAAGCAGTAGTGAAGGATTTGCTTGATGTTTTGCTTGATATCTATGCTGATCAAAGTTCTGAGATTAGATTAACAAGAGAAAATATTAAAGCCTTCATTATGAACATGATTGGTGCTGGAACAGAGACATCGGCAGTTACAATAGAATGGGCATTATCTGAGTTAATAAACCACCCAGAAATGATGTCAAAGGCAAGAGAAGAAATCGATTCAATAGTTGGTAAGAACAGATTGGTAGAGGAATCAGATATTCAAAATCTTCCCTATCTTCAATCCGTAGTAAAAGAAACAATGAGGCTTCACCCAACTGGACCCTTAATTGTGAGACAATCAACTGAAGATTGCAACGTTAATGGATACCATATTCCATCAAAAACCACTGTGTTTGTGAATGTTTGGAGTATTGGGAGGGACCCAAGTTACTGGAAGGACCCACTCGAGTTCATGCCAGAGAGGTTCATGAATGAAGAGGGAGAGAGTGAGTTGGATTTGAAGGGACAGAATTTTGAGTTGTTGTCGTTTGGTGCTGGGAGAAGGAGTTGTCCTGGTGCTGCATTGGCTTTGAATGTTGTTCATACAACGTTGGCTGCTATGATTCAGTGCTTTGAATGGAAGGGTAATAATGGGATTGTTGATATGGAGGAAGGGCCTGGAATGGCACTTCCTAGGGCACATCCCTTGTTGTGTATTCCTGTGGTTAGACTCTCTCCTTTTGAGAAGACTCGGTTTTCATTTGATTAG 1557 0.422 MADFGTYSLLLLIWVASTLFLRVIFSKHGINNGSRNLPRSPIALPIIGHLYLLRKLPHQSFHKISTRYGPLVYLLFGSKACVLVSSPEMARQCLKTHETCFLNRPKRTNLDYITYGSSDFVLAPYGPYWRFMKKLCMTELLGGRILQQHLPIRAQEIRLFLTGMMKKAEMREEVNVGSELAMVANNIITRMALRRRCCDVGGEGHQLIELVKEMTELGGKFNLGDMFWFVKMFDLQGFGKRLESVRSRYDAIMERIMKEHQDARRNRKTIGDEAVVKDLLDVLLDIYADQSSEIRLTRENIKAFIMNMIGAGTETSAVTIEWALSELINHPEMMSKAREEIDSIVGKNRLVEESDIQNLPYLQSVVKETMRLHPTGPLIVRQSTEDCNVNGYHIPSKTTVFVNVWSIGRDPSYWKDPLEFMPERFMNEEGESELDLKGQNFELLSFGAGRRSCPGAALALNVVHTTLAAMIQCFEWKGNNGIVDMEEGPGMALPRAHPLLCIPVVRLSPFEKTRFSFD* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1980 518 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 510 - -
Amo02g1980 518 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1980 518 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1980 518 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1980 518 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1980 518 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1980 518 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1980 518 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1980 518 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1980 518 Gene3D Cytochrome P450 26 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1980 518 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1980 518 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1980 518 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1980 518 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1980 518 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 510 - -
Amo02g1980 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Amo02g1980 518 Pfam Cytochrome P450 38 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1980 518 SUPERFAMILY Cytochrome P450 39 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1980 Amo-Chr2 65329978 65333945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1980 1 506 Cytochrome P450 AT5G06900 51.663 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1980 K24188 - gmx:100807524 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g1805 12 86367433 86374619 Amo02g1980 02 65329978 65333945 hybridization
Amo16g0157 16 2092713 2095435 Amo02g1980 02 65329978 65333945 PCT