Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1974 ATGAACATGGCTTCCTCAGCCTTAATGTTATTTCTTCTAGTCTTGTACTTTTCATTTCAATTCTCATCTTGTTTAGATGCACTGAACAAAGGCTACTCCTCTCTCTCAGTGGAGAAAGCTGAACAAGATATCATTGTTTCAGAAAATGGCATGTTCTCCGCCGGCTTCTTTGAAGTGGGTGGTAATGCCTTCTCCTTCGCAATATGGTTCACTACAAGGCCTGATTCCCAAAACATTACAACTCCTACCGTTGTTTGGATGGCAAATCGCGACCAACCTGTGAATGGAAAGCGCTCAAAGCTTTCTCTCTTGCACACCGGCAATCTTGCTTTGGTAGATGCAGGTCAGTTCCAAGTATGGTCTTCTGAGACGGAGTCAAATGTTCCAACCGAGTTACGTCTCGGAAATGATGGCAATCTTGTTCTACGAGAGCTGCCAGCAGGACATATTCTGTGGCAAAGTTTTGATTTCCCAACCGACACTCTTCTTCCCGGGCAACATCTCACCAGAAGTACACAATTAGTTTCTTCAAGAACAGAGACTAATCATTCCTCTGGTTTCTATAAGTTCTCCTTTGATGATGGAAACGTTCTCACCCTTGTTTATGATGGCCCTGATGTGTCAAGCACTTATTGGCCCTCTTCTGCGATCTTAGCTTGGCAAGCTGGAAGGTTTACTTACAATAGTAGCAGAATTGCGGTGCTAAATCCTCTTGGAGGTTTTGATTCATCGGATAATTATAATAAAAGAACATCTGATTATGGGGCGGTGCTGCCTAGAAGGTTGACAATCGATCATGATGGAAATCTTCGAGTGTATAGCCAAGATCGATCACAAAAATGGTACGTCTCATTGCAAGCCATTTCTGACAGTTGCACCATTCATGGGATTTGTGGTGCTAATAGTGTTTGCAGATTTGATCTCAAAAAGGGAAGGAAGTGCTCATGTGTTCCTGGATACAAAGTAAAGAATCAAAGTGATTGGTCTTATGGGTGTGAATCCATATTTGCTGCTACATCTAATGAAAGTAAGTATTCATACGACAACGGTGCGAGCCTGTTCAAGTGCTATACAAAAACACAATTGCTCAACGGACATTTTCCAGGAGGCGCAGGAACTATAACCTACTTGAAAGTGCCCAAAGGGAAGAGCTTTCCCACCAGCTATGAAGACTCTGTCATCAGAAACAATGGTTGTTCATTGAAAATTCATAGAGAGTATTCAAAAAAGCATGTAAGCCATTTTGTGAGCTTCCTTTTGTGGTTTGCCACAGCAATTGGAGTTCTTGAAATGGCTTGCGTCTTGGTTGTTTTGTTCTTAATCAAGAGCCAGCACAATTCTAGCATAGATCCACATGGCCATCATCTTGCAACAGTGGGATTTAGAAAATTTAGCTATTCTGAGCTAAAAAAGGCGACAAAAGGATTCAGCCAAGAGATTGGAAGGGGTGCAGGAGGCATTGTATACAAAGCTATTTTGTCGGATCAAAGAATGCTGCTTGTTAAAGAAACTCATGATGCTATGCAAGGAGAAGGTGAATTCCTTGCTGAAGTGAGCATCATTGGAAGGCTCAACCACATGAACTTGATTGAAATGTGGGGTTATTGTGCTGAGGGAAAGCATCGGCTATTGGTGTACGAGTACATGGAAAATGGTTCTTTGGCAGATAACCTCTCATCCAATACACTTGATTGGAGCAAGAGGTATAACGTCGCTCTCGGAACAGCAAGAGGTTTGGCATATTTACATGAAGAATGCTTGGAATGGATTTTGCATTGTGATATAAAACCTCAAAATATTCTCCTAGATTCAAATTATCAACCCAAGGTTGCAGATTTTGGATTGTCCAAGTTATTGAACAGGGATGTTCTCAACAACGATCGCAATTTCTCAATGATAAGAGGAACCAGAGGGTATATGGCGCCTGAGTGGGTTTTCAACCTAGCAGTTACTTCCAAAGTGGATGTTTATAGCTATGGAATTGTTCTCTTGGAGATGATAACCGGAAAGAATCCAGCAGCAGATATTCAAGCAATTAATGGAGAAGAACCATACAATGGGAGGCTAGTAACATGGGTGAGAGAGAAAAAGAGAGAATGTGCATCTTGGGTGGAGCAAATCATGGATTCTGCATTAGGGTCAAATTATGATGAGAATAAGATGGAAATTTTGGCTAGAGTGGCATTGGATTGCATAGAAGAGGACAATGAACAAAGGCCTACCATGAGCCAAGTCGTTGAAATGCTTCAAAGCCAAGATTGTGATCCTAATGGTGAAGCATAA 2283 0.4166 MNMASSALMLFLLVLYFSFQFSSCLDALNKGYSSLSVEKAEQDIIVSENGMFSAGFFEVGGNAFSFAIWFTTRPDSQNITTPTVVWMANRDQPVNGKRSKLSLLHTGNLALVDAGQFQVWSSETESNVPTELRLGNDGNLVLRELPAGHILWQSFDFPTDTLLPGQHLTRSTQLVSSRTETNHSSGFYKFSFDDGNVLTLVYDGPDVSSTYWPSSAILAWQAGRFTYNSSRIAVLNPLGGFDSSDNYNKRTSDYGAVLPRRLTIDHDGNLRVYSQDRSQKWYVSLQAISDSCTIHGICGANSVCRFDLKKGRKCSCVPGYKVKNQSDWSYGCESIFAATSNESKYSYDNGASLFKCYTKTQLLNGHFPGGAGTITYLKVPKGKSFPTSYEDSVIRNNGCSLKIHREYSKKHVSHFVSFLLWFATAIGVLEMACVLVVLFLIKSQHNSSIDPHGHHLATVGFRKFSYSELKKATKGFSQEIGRGAGGIVYKAILSDQRMLLVKETHDAMQGEGEFLAEVSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLADNLSSNTLDWSKRYNVALGTARGLAYLHEECLEWILHCDIKPQNILLDSNYQPKVADFGLSKLLNRDVLNNDRNFSMIRGTRGYMAPEWVFNLAVTSKVDVYSYGIVLLEMITGKNPAADIQAINGEEPYNGRLVTWVREKKRECASWVEQIMDSALGSNYDENKMEILARVALDCIEEDNEQRPTMSQVVEMLQSQDCDPNGEA* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1974 760 Gene3D Phosphorylase Kinase; domain 1 441 548 - -
Amo02g1974 760 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 214 IPR036426 -
Amo02g1974 760 PIRSF SRK 355 758 IPR024171 GO:0004674
Amo02g1974 760 PIRSF SRK 1 365 IPR024171 GO:0004674
Amo02g1974 760 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 8 344 - -
Amo02g1974 760 CDD B_lectin 45 158 IPR001480 -
Amo02g1974 760 Pfam S-locus glycoprotein domain 259 323 IPR000858 GO:0048544
Amo02g1974 760 Gene3D Transferase(Phosphotransferase) domain 1 549 757 - -
Amo02g1974 760 Pfam Protein kinase domain 477 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g1974 760 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 344 754 - -
Amo02g1974 760 ProSiteProfiles Protein kinase domain profile. 474 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g1974 760 SMART blect_4 36 158 IPR001480 -
Amo02g1974 760 SUPERFAMILY Protein kinase-like (PK-like) 449 752 IPR011009 -
Amo02g1974 760 ProSiteProfiles Bulb-type lectin domain profile. 42 155 IPR001480 -
Amo02g1974 760 Pfam D-mannose binding lectin 83 173 IPR001480 -
Amo02g1974 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 590 602 IPR008271 GO:0004672|GO:0006468
Amo02g1974 760 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 344 754 - -
Amo02g1974 760 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 8 344 - -
Amo02g1974 760 Gene3D - 36 157 IPR036426 -
Amo02g1974 760 SMART serkin_6 474 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g1974 760 CDD STKc_IRAK 480 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1974 Amo-Chr2 64629331 64631736 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1974 464 751 Trihelix Transcription Factor Family AT5G38560 41.892 1.15e-63 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Amo02g1974 Pkinase 6.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1974 - - aip:107625486 1490.71