Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1973 ATGGCTTCCTCAACCTTAATGTTATTTCTTCTAGTCTTGTACTTTTCATTTCAATTCTCATCATCTTTAGATGCACTGAACAAAGGCTACTCCTCTCTCTCAGTGGAGAAAGCCGAACAAGATATCATTGTTTCAGAAAATGGCATGTTCTCTGCGGGCTTCTTTGAAGTTGGTGATAATGCCTTCTCCTTTGCAATATGGTTCACTACAAGGCCTGATTCCCAAAACATTACAACTCCTACTGTTGTTTGGATGGCAAATCGTGACCAACCTGTGAATGGAAAGCGCTCAAAGCTTTCTCTCTTGCACACCGGCAATCTTGCTTTGGTAGATGCAGGTCAGTTCCAAATATGGTCTTCTGAGACGGAGTCATATCTTCCAACAGAATTACGACTCGGAGATGATGGCAATCTTGTTCTACGAGAGTTGCAAGGAGGACGTATTCTGTGGCAGAGTTTTGATTTCCCAACTGACACTCTTCTTCCCGGACAACATCTCACCAGAAGTACACAGTTAGTTTCTTCAAGAACAGAGAGTAACCATTCCTCTGGTTTCTATAAGTTGTCCTTTGACAATAGAAACGTTCTTACCCTTCTTTACGATGGCCCTGACGTGTCGAGCACTTATTGGCCCGATCTTGTGCTCACAGTTTGGGAAGCTGGAAGGTTTACTTACAATAGTAGCAGAATTGCGGTGCTAAATCCTCTTGGACATTTCGATTCGTCAGATAATTATAGTGTAAGAACATCTGATTACGGTGTGATGCTGCCTAGAAGGTTGACAATCGATCATGATGGAAATCTTCGAGTGTACAGTCAAGATCTATCACAAAAATGGTACGTCTCAATGCAAGCCATTTCTAACAGTTGCAGCATTCATGGGATTTGTGGGAGGAAATGTTCATGTGTTCCTGGGTACAAAGTAAAGAATCAAAGTGATTGGTCTTATGGGTGTGAATCCATTTTTTCTGCTACGTGTAATGAAAGTGACTTTACTTTCTTAGGATTGGACCGATATTCATATGACAACGTTAAGGGCGTCTTCAAGTGCTATAGAAAAAGAGAATTGCTCAACGGACATTTGCCAGGAGCTGCGAGAACTATAACCTACTTGAAAGTGCCCAAAGGGAACAGATTTCCCACCAGTTATAAAGACTCTGTCATCAGAAACAGTGATTGTTCTGTGAAAATTCATAGAGAATATTTGAAAAAACATGTAAGCCATTTTGTGAGCTTCCTTTTGTGGTTTGCCGCTGCAATTGGAGTTCTTGAAATGACTTGCATTTTTGTTGTTTTGTTCTTAATCAAGTGCCAGCACAATTCTAGCATGGATCCACATGGCCATCATCTTGCAGCGGTGGGATTCAGAAAATTTACCTATTCTGAGCTAAAAAAGGCGACAAAAGGATTCAGCCAAGAGATTGGAAGGGGTGCAGGAGGCACTGTATACAAAGCTCTGTTGTTGGATCAAAGAATTGCTGCAGTAAAGAAACTCAATGATGCTAAGCAAGGAGAAGGTGAATTCCTTGCTGAAGCGAGCATCATTGGAAGGCTCAACCACATGAACTTGATTGAAATGTGGGGTTATTGCGCCGAGGGAAAGCATCGGCTATTGGTGTACGAGTACATGGAAAATGGTTCTTTGGCAGATAACCTCTCATCCAATACACTTGATTGGAGCAAGAGGTATAACATCGCTCTCGGAACAGCAAGAGGTTTGGCATATTTACATGAAGAATGCTTGGAATGGATTTTGCATTGTGATATAAAACCTCAAAATATTCTCTTGGATTCAAATTATCAACCCAAGGTTGCAGATTTCGGATTGTCCAAGTTATTGAACAGAGATGTTCTCACCAACAATCCAAATTTCTCAATGATAAGAGGAACCAGAGGGTATATGGCGCCTGAGTGGGTTTTCAACCTAGCAGTTACTTCCAAAGTGGATGTTTATAGCTATGGAATTGTTCTCTTGGAGATGATAACTGGAAAGAATCCGGCAGCAGATATTCAAGCAATTAATGGAGAAGAACCATACAATGGGAGGCTAGTAACATGGGTGAGAGAGAAAAGGAGAGAATGTGCATCTTGGGTGGAGCAAATCTTGGATTCTGCATTAGGGTCAAATTATGATGACAATAAGATGGAAATTCTGGCTAGAGTGGCTTTGGGTTGCATAGAAGAGGACAAAGAAGAGAGGCCTACCATGAGCCAAGTCGTTGAAATGCTTCAAAACCAAGATTGTGATCCTAATGGTGGAGTATACTATTAA 2271 0.413 MASSTLMLFLLVLYFSFQFSSSLDALNKGYSSLSVEKAEQDIIVSENGMFSAGFFEVGDNAFSFAIWFTTRPDSQNITTPTVVWMANRDQPVNGKRSKLSLLHTGNLALVDAGQFQIWSSETESYLPTELRLGDDGNLVLRELQGGRILWQSFDFPTDTLLPGQHLTRSTQLVSSRTESNHSSGFYKLSFDNRNVLTLLYDGPDVSSTYWPDLVLTVWEAGRFTYNSSRIAVLNPLGHFDSSDNYSVRTSDYGVMLPRRLTIDHDGNLRVYSQDLSQKWYVSMQAISNSCSIHGICGRKCSCVPGYKVKNQSDWSYGCESIFSATCNESDFTFLGLDRYSYDNVKGVFKCYRKRELLNGHLPGAARTITYLKVPKGNRFPTSYKDSVIRNSDCSVKIHREYLKKHVSHFVSFLLWFAAAIGVLEMTCIFVVLFLIKCQHNSSMDPHGHHLAAVGFRKFTYSELKKATKGFSQEIGRGAGGTVYKALLLDQRIAAVKKLNDAKQGEGEFLAEASIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLADNLSSNTLDWSKRYNIALGTARGLAYLHEECLEWILHCDIKPQNILLDSNYQPKVADFGLSKLLNRDVLTNNPNFSMIRGTRGYMAPEWVFNLAVTSKVDVYSYGIVLLEMITGKNPAADIQAINGEEPYNGRLVTWVREKRRECASWVEQILDSALGSNYDDNKMEILARVALGCIEEDKEERPTMSQVVEMLQNQDCDPNGGVYY* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1973 756 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 5 341 - -
Amo02g1973 756 Gene3D Transferase(Phosphotransferase) domain 1 543 751 - -
Amo02g1973 756 SMART serkin_6 468 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g1973 756 ProSitePatterns Protein kinases ATP-binding region signature. 474 497 IPR017441 GO:0005524
Amo02g1973 756 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 5 341 - -
Amo02g1973 756 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 338 748 - -
Amo02g1973 756 Pfam Protein kinase domain 471 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g1973 756 SUPERFAMILY Protein kinase-like (PK-like) 442 746 IPR011009 -
Amo02g1973 756 CDD STKc_IRAK 474 745 - -
Amo02g1973 756 PIRSF SRK 363 751 IPR024171 GO:0004674
Amo02g1973 756 PIRSF SRK 1 355 IPR024171 GO:0004674
Amo02g1973 756 Gene3D - 155 282 IPR036426 -
Amo02g1973 756 Gene3D - 34 154 IPR036426 -
Amo02g1973 756 ProSiteProfiles Protein kinase domain profile. 468 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g1973 756 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 338 748 - -
Amo02g1973 756 CDD B_lectin 43 156 IPR001480 -
Amo02g1973 756 ProSiteProfiles Bulb-type lectin domain profile. 27 153 IPR001480 -
Amo02g1973 756 SMART blect_4 34 156 IPR001480 -
Amo02g1973 756 Pfam D-mannose binding lectin 81 171 IPR001480 -
Amo02g1973 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 584 596 IPR008271 GO:0004672|GO:0006468
Amo02g1973 756 Gene3D Phosphorylase Kinase; domain 1 435 542 - -
Amo02g1973 756 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 210 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1973 Amo-Chr2 64593746 64596242 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1973 458 743 Trihelix Transcription Factor Family AT5G38560 41.156 3.87e-62 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Amo02g1973 Pkinase 1e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1973 - - aip:107625486 1377.07