Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1918 ATGAGCTCCAAGGAGAAACCCACTCTCGGTGGCACGCGGATTAAGACCCGCAAGCGGAATATTGCGGCGCCTTTGGACCCTGAAGCATTCTCGGATGCAGTGGTCCAGATTTATTTGGATAATGCTGGTGATCTGGAACTTGTTGCTAAGAGCATTGAGTCTTCAGAACTTGACTTCTCAAGATACGGTGACACCTTTTTCGAGGTTGTTTTCATTGGTTGTCGTACACAACCTGGAACAACCAAGCCTGATGAAGGGGATCGCCATCCTTACTCTATAATAGAGTGTGAGCCGAAGCGGGAAGTCATTTTGCCATCGGTGATCTACACACAAAAGATTTTGCGAAGGAAGCCATTCCTCATAAAGAATCTTGAAAATGTCATGCGAAGATTCCTACAATCCTTGGAGTTTTTTGAAGAAAATGAAAGGAAAAAGTTGGCAATCTTCACGGCACTTGCATTCTCTCAGAAGCTATCCGGTCTTCCTCCAGAGACTGTCTTCCAACCACTTCTTAAAGATAATCTTGTGGGCAAAGGGCTAGTTCTGTCCTTCGTAACTGAGTTCTTTAAGGAGTATCTGGTTGACAACAGCCTTGATGATCTTATTTCAATTCTGAAACGGGGAAAAGTGGAGGATAATCTTTTGGACTTTTTCCCCCCTTCAAAAAGATCAAATGAGTCTTTTGCTGAGCATTTCAAGAAGGAAGGACTGATAACCTTGGTGGAGTATAATGAGAAGAAAATATTCGAAGTTAAACTTAAGGAAATGAAGTCTACTTTGACGACACTGATAACGGAGGAAGCTGATATATCTGAAGTCATAGAAACAGTGAAGCTGCAAGTTAAAGATGCTAAATTGCCAGATATTGAGGTTGTGCGGGTGTTGTGGGATGTTTTAATGGATGCTGTTCAGTGGTCAGGAAAAAATCAGCAACAGAATTCAAATTCAGCCCTGCGCCAGGTAAAAACTTGGGCACCATTGTTGAATACGTTCTGCACCAGTGGGAAGCTTGAGCTTGAACTGATGTACAAAGTACAGATGCAATGCTACGAGGATGCGAAACTCATGAAGCTGTTCCCTGAGATTATAAGGTCCCTTTATGAGCAGGATGTGCTGGCTGAAGACACGATTCTTCACTGGTTCCGCAGAGGAACGAACACCAAGGGCAGGCAAAGCTTTGTGAAGGCACTTGAACCCTTCGTCAATTGGCTTGAGGAGGCGGAAGAGGAAGAATGA 1236 0.4385 MSSKEKPTLGGTRIKTRKRNIAAPLDPEAFSDAVVQIYLDNAGDLELVAKSIESSELDFSRYGDTFFEVVFIGCRTQPGTTKPDEGDRHPYSIIECEPKREVILPSVIYTQKILRRKPFLIKNLENVMRRFLQSLEFFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVGKGLVLSFVTEFFKEYLVDNSLDDLISILKRGKVEDNLLDFFPPSKRSNESFAEHFKKEGLITLVEYNEKKIFEVKLKEMKSTLTTLITEEADISEVIETVKLQVKDAKLPDIEVVRVLWDVLMDAVQWSGKNQQQNSNSALRQVKTWAPLLNTFCTSGKLELELMYKVQMQCYEDAKLMKLFPEIIRSLYEQDVLAEDTILHWFRRGTNTKGRQSFVKALEPFVNWLEEAEEEE* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1918 411 Gene3D - 242 411 - -
Amo02g1918 411 SMART 542_3 325 410 IPR003307 GO:0005515
Amo02g1918 411 Pfam eIF4-gamma/eIF5/eIF2-epsilon 338 411 IPR003307 GO:0005515
Amo02g1918 411 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 1 411 - -
Amo02g1918 411 ProSiteProfiles W2 domain profile. 246 411 IPR003307 GO:0005515
Amo02g1918 411 CDD W2_eIF5C_like 216 404 IPR043510 -
Amo02g1918 411 SUPERFAMILY ARM repeat 252 408 IPR016024 -
Amo02g1918 411 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 411 - -
Amo02g1918 411 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1918 Amo-Chr2 61754235 61758826 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1918 300 407 Eukaryotic Initiation Factors Gene Family AT2G34970 30.000 1.28e-07 52.0