Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1917 ATGTTTGGTAGGGCATGGCCCCTTAAAGCCACAGTCAAAGATGGCCCAGTTACATTGTGGCCCCAGTTGGCTGAAGATGGCCACATTCCTTGTGTCAGTGATGAGGTAGCAACTTCATGGCTGAATAACCAAGAAGTCAGACAAGCCATTCATGCTAAACCAGAAAGTGTTTCGGGTCCGTGGGAATTATGCACTGGAAGGATATATTACAATCACGATGCTGGAAGCATGATTCCATACCACAAGAAACTAACGATCATGGGCTATCGAGCACTAATTTTCAGTGGTGACCATGATATGTGTGTGCCATTTACTGGAACTGAGGCATGGACACGATCTCTTGGATATAAGATCATAGATGAATGGAGGCCATGGACCTCTAATGACCAAGTTGCTGGATACTTGCAAGCATACAATCACAACCTCATCTTCCTCACTGTCAAGGGAGCTGGACACACAGTCCCTGAATACAAGCCACGCGAGGCACTGGATTTTTACAGCAGATGGTTGGAAGGGAAATCCATATAA 528 0.4583 MFGRAWPLKATVKDGPVTLWPQLAEDGHIPCVSDEVATSWLNNQEVRQAIHAKPESVSGPWELCTGRIYYNHDAGSMIPYHKKLTIMGYRALIFSGDHDMCVPFTGTEAWTRSLGYKIIDEWRPWTSNDQVAGYLQAYNHNLIFLTVKGAGHTVPEYKPREALDFYSRWLEGKSI* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1917 175 Pfam Serine carboxypeptidase 24 172 IPR001563 GO:0004185|GO:0006508
Amo02g1917 175 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 174 IPR001563 GO:0004185|GO:0006508
Amo02g1917 175 PANTHER CARBOXYPEPTIDASE 11 174 - -
Amo02g1917 175 ProSitePatterns Serine carboxypeptidases, histidine active site. 142 159 IPR033124 GO:0004185
Amo02g1917 175 Gene3D alpha/beta hydrolase 10 175 IPR029058 -
Amo02g1917 175 SUPERFAMILY alpha/beta-Hydrolases 19 174 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1917 Amo-Chr2 61749074 61753894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1917 36 175 Calmodulin-binding Proteins AT2G22960 48.571 4.96e-46 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1917 K16296 - gmx:100781451 310.842