Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1911 ATGGAGTTCCTACGTATTTTGTTATCTTCCATTTGTTTGTTGGTTGTGATTGATCACTGGCAAGGAAATGCTGAACCTGTCGGAGATAAGGAAGCTTTGCTTGATTTTGTGAACAAATTCCCTCCTTCTAGACCTCTGAATTGGGATGAGACCTCCTCCATGTGTGCCAATTGGACCGGAGTCACTTGCAGTGAAGATGAGTCCCGGGTCATCGCCATTCGTCTGCCGGGGGTTGGATTTCGTGGCCCAATTCCGCCGGATACTGTTAGCCGCCTCTCGGCACTGCAAACTTTGAGCCTCAGATCCAATGTCATAACTGGGCGGATACCTTCTGACTTTTCTAATTTGAAGAACTTAACTTTACTGTATCTTCAGTTCAACAATTTCTCTGGTCCTTTGCCTGATTTCTCAGTTTGGAAGAATCTTACTATTGTCAATCTGTCCAATAACCATTTCAATGGCAGCATTCCTGATTCCCTTTCCAATTTGACCGAGATTGCTGGTTTGAACCTTGCAAACAACTCGCTTTCTGGCGAAATTCCCAATCTCCAGTTGCCAAGACTGCAGCTGCTGAATCTGTCTAACAACAATTTGCATGGGAGTGTGCCTAAATCCCTCCAGAGGTTTCCTGATTCGTCATTTTTTGGAAATAATATTTCTCTTGGGAGCTCTCCTGTTGTTCCGCCAGTGCCTCCTCCGGTTTATGGGCCTTCTTCAAGATCTAAGAAGCATGGAAGGCTCAGCGAAACAGCACTGCTGGGAATTACTATTGCCTGTGGTGTTCTAGGCCTTGTGGCATTTGTTTTCTTGATCTTTGTATGCTGCTCAAGAAGGAGGGGTGAAGATGATGATGCCTTCAGTGGGAAGTTGCACAAGGGTGACATGTCTCCCGAGAAAGCTGTATCGAGGAACCAGGATGCGAATAATAAGCTGTCTTTCTTTGAGGGGTGTAATTATGCTTTTGATTTGGAGGATTTACTCAGGGCTTCTGCTGAGGTACTGGGAAAGGGAACGTTTGGTACTGCATACAAGGCAATACTGGAAGATGCAACCACGGTTGTTGTGAAGAGGTTAAAGGAGGTAGCAGTTGGAAAGAAGGATTTTGAGCAACACATGGAAATAGTAGGAAACCTTAAACATGAGAATGTGGTTGAGCTCAAGGCATATTATTATTCCAAAGATGAGAAATTAATGGTATATGATTACTATAGCCAGGGGAGTGTCTCGTCAATGTTACACGGTAAACTCGTGCATGGCAACATCAAATCCTCAAATATCTTCCTCAATGCTAAACAGTATGGTTGTGTATCCGACCTTGGTCTCGCATCCATAATGAGCTCACTTGCCTTACCCATCTCACGAGCTGCTGGTTACCGAGCACCTGAAGTTACGGACACCAGGAAAGCGGCACAACCTTCAGATGTTTACAGCTTTGGCGTGGTGTTACTTGAGCTTCTGACAGGGAAATCTCCTATTCACACAACTGGTGGGGATGAGATTATCCACCTGGTGAGATGGGTTCATTCGGTTGTGCGAGAGGAGTGGACAGCTGAGGTGTTTGACTTAGAGCTGATGAGGTATCCAAATATAGAGGAAGAGATGGTGGAAATGCTACAGATAGCAATGTCATGCGTGGTAAGGATGCCCGACCAGAGACCAAAGATGTCTGAAGTTGTGAAGATGATAGAAAATGTGAGGCAAATTGATGCAGAGACTCGGCCGTCGTCGGACAACCAAGCAGAACAGAAATTACCACAACATGACATCGATAATTCCCCTTCTTCCTCTCCCTCACCCTTGCCAAAAGGAAGTGAATGA 1818 0.4532 MEFLRILLSSICLLVVIDHWQGNAEPVGDKEALLDFVNKFPPSRPLNWDETSSMCANWTGVTCSEDESRVIAIRLPGVGFRGPIPPDTVSRLSALQTLSLRSNVITGRIPSDFSNLKNLTLLYLQFNNFSGPLPDFSVWKNLTIVNLSNNHFNGSIPDSLSNLTEIAGLNLANNSLSGEIPNLQLPRLQLLNLSNNNLHGSVPKSLQRFPDSSFFGNNISLGSSPVVPPVPPPVYGPSSRSKKHGRLSETALLGITIACGVLGLVAFVFLIFVCCSRRRGEDDDAFSGKLHKGDMSPEKAVSRNQDANNKLSFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATTVVVKRLKEVAVGKKDFEQHMEIVGNLKHENVVELKAYYYSKDEKLMVYDYYSQGSVSSMLHGKLVHGNIKSSNIFLNAKQYGCVSDLGLASIMSSLALPISRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTGKSPIHTTGGDEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSEVVKMIENVRQIDAETRPSSDNQAEQKLPQHDIDNSPSSSPSPLPKGSE* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1911 605 Pfam Leucine Rich Repeat 187 208 IPR001611 GO:0005515
Amo02g1911 605 Pfam Leucine Rich Repeat 141 163 IPR001611 GO:0005515
Amo02g1911 605 PANTHER PROTEIN, PUTATIVE-RELATED 23 415 - -
Amo02g1911 605 PANTHER PROTEIN, PUTATIVE-RELATED 414 576 - -
Amo02g1911 605 SUPERFAMILY L domain-like 39 209 - -
Amo02g1911 605 Pfam Leucine rich repeat 84 129 IPR001611 GO:0005515
Amo02g1911 605 Pfam Leucine rich repeat N-terminal domain 29 64 IPR013210 -
Amo02g1911 605 Pfam Protein kinase domain 415 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g1911 605 Pfam Protein kinase domain 331 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g1911 605 PANTHER OS05G0588300 PROTEIN 23 415 - -
Amo02g1911 605 PANTHER OS05G0588300 PROTEIN 414 576 - -
Amo02g1911 605 SUPERFAMILY Protein kinase-like (PK-like) 332 574 IPR011009 -
Amo02g1911 605 Gene3D Phosphorylase Kinase; domain 1 294 402 - -
Amo02g1911 605 Gene3D Ribonuclease Inhibitor 138 225 IPR032675 -
Amo02g1911 605 ProSitePatterns Protein kinases ATP-binding region signature. 334 365 IPR017441 GO:0005524
Amo02g1911 605 Gene3D Transferase(Phosphotransferase) domain 1 407 590 - -
Amo02g1911 605 MobiDBLite consensus disorder prediction 569 605 - -
Amo02g1911 605 ProSiteProfiles Protein kinase domain profile. 328 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g1911 605 MobiDBLite consensus disorder prediction 568 605 - -
Amo02g1911 605 Gene3D Ribonuclease Inhibitor 28 137 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1911 Amo-Chr2 61528045 61530639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1911 1 600 Receptor kinase-like Gene Family AT4G23740 61.335 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo02g1911 Pkinase 2.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1911 - - adu:107479781 1132.86