Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1903 ATGTCTTTAGAAAGATCAGAAGTGATTAGAGCTGTAATTGTACGTACTTGTAAAGAACTTAAACGTAGCAATGGCATGATAATACAGTATGATGATAATGCCACGGTTGTCATTGATCAAGAGGAAAATCCAAAAGGAACTCGAATTTTTGGCGCAATCGCCCGGGAATTGAGACAGTTAAATTTCACTAAAATAGTTTCATTAGCACCTGAGGACACCATCGCCGACATAATAACCTCTATACGAAATGCTGACATGAATGGAAGAGGAACAGTTCTAATACCATCTACTAACATTACTGAAAATATTGCTAAAATGCTTTTACGAAAGGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGCTCGTAGTTGGACCTTGGGTTGGGCCGATCGGTCCGCCGTCGGTGTGCACCGGTCGGCTCGTCCCTTCTGCCAGCGATGCGCTCCTGGCCTTAACTGGCCGGGTCGTGCCTCTGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATCATAGGATTCCGATCCTATTGGGCATTCGTATTTCATACATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCAGCGGATGTTACTTTTAGGACTCCGCTGGCACCTTATGATAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCTTGCGGCTTAA 858 0.458 MSLERSEVIRAVIVRTCKELKRSNGMIIQYDDNATVVIDQEENPKGTRIFGAIARELRQLNFTKIVSLAPEDTIADIITSIRNADMNGRGTVLIPSTNITENIAKMLLRKVQSKSLNEDPLEGKSGASSRARSWTLGWADRSAVGVHRSARPFCQRCAPGLNWPGRASGAVTLKKLECSKQAYALYTLAWDNIIGFRSYWAFVFHTFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVTFRTPLAPYDKSKSLGSGGSMVARLKLKGIDGRAPPGVELAA* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1903 285 ProSitePatterns Ribosomal protein L14 signature. 11 37 IPR019972 -
Amo02g1903 285 Gene3D - 72 112 - -
Amo02g1903 285 Pfam Ribosomal protein S8 72 109 IPR000630 GO:0003735|GO:0005840|GO:0006412
Amo02g1903 285 SUPERFAMILY Ribosomal protein L14 3 71 IPR036853 GO:0003735|GO:0005840|GO:0006412
Amo02g1903 285 SMART Ribosomal_L14_2 1 73 IPR000218 GO:0003735|GO:0005840|GO:0006412
Amo02g1903 285 Pfam Ribosomal protein L14p/L23e 4 71 IPR000218 GO:0003735|GO:0005840|GO:0006412
Amo02g1903 285 Gene3D Ribosomal protein L14 1 71 IPR036853 GO:0003735|GO:0005840|GO:0006412
Amo02g1903 285 SUPERFAMILY Ribosomal protein S8 72 109 IPR035987 GO:0003735|GO:0005840|GO:0006412
Amo02g1903 285 PANTHER INTRON-ENCODED HOMING ENDONUCLEASE, PUTATIVE-RELATED 129 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1903 Amo-Chr2 61274683 61276322 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1903 5 60 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 37.500 4.30e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1903 - - adu:110277264 241.891