Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1891 ATGGCTGACAAAGCGGTTACCATCAGAACAAGGAAGTTTATGACTAACAGGCTCCTCTCCAGAAAGCAATTCGTCATTGATGTTCTTCATCCAGGGAGGGCAAATGTTTCTAAGGCTGAGCTTAAGGAGAAGCTTGCTAGAATCTATGATGTTAAGGACCCCAACACCGTCTTTGTGTTTAAGTTCCGCACCCATTTCGGAGGTGGCAAATCCACTGGTTTTGGTTTGATTTATGACACTGTTGAGAATGCAAAGAAGTATGAGCCTAAGTACAGACTAATTAGGAATGGACTTGATACTAAGGTTGAAAAGTCAAGGAAGCAAATGAAGGAGAGAAAGAACAGGGCAAAGAAGATCCGTGGAGTAAAGAAGACCAAGGCTTCTGATGCTGCCAAGGCTGGAAAGAAATGA 411 0.4307 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFKFRTHFGGGKSTGFGLIYDTVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKK* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1891 136 Hamap 30S ribosomal protein S24e [rps24e]. 4 106 IPR001976 GO:0003735|GO:0005840|GO:0006412
Amo02g1891 136 PANTHER 40S RIBOSOMAL PROTEIN S24 1 135 IPR001976 GO:0003735|GO:0005840|GO:0006412
Amo02g1891 136 Pfam Ribosomal protein S24e 25 103 IPR001976 GO:0003735|GO:0005840|GO:0006412
Amo02g1891 136 Gene3D - 1 132 - -
Amo02g1891 136 PANTHER 40S RIBOSOMAL PROTEIN S24 1 135 - -
Amo02g1891 136 ProSitePatterns Ribosomal protein S24e signature. 66 88 IPR018098 -
Amo02g1891 136 MobiDBLite consensus disorder prediction 102 136 - -
Amo02g1891 136 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 6 108 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1891 Amo-Chr2 60831296 60834094 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1891 1 132 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 87.879 9.53e-85 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1891 K02974 - gmx:100499852 267.314