Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1887 TTTGTCGGAAAAGAGAATCCATCAATAATTCTGTCGGAAAAATTAATTGTTTTTCCAGTCCATTTAGATGAGAATGTGTATAATGGAGCTCTAAATTTCAATCCTTGGAGATGGATGGAACCTGAAAATGAGAAGAGAATCAGGAGAATTAGTCCATTCTATGCACCATTTGGAGGAGGTGCAAGATTTTGTCCTGGAGCTGAGCTTGTTCGCCTTCAGATTGCACTTTTTCTTCATTACTTTGTAACTACCTACAGGCTCCTAAACGAGGAGAAGGTTACGAACCCGTTGTTAGAGAAGCTTCCTAAGCAATTCGGGATCAAAGGAGCATTGCTGCCAAAGAGGGATTTGACTCGTTTCGAAGAAGAGGATCCTCAATTAGAAGTTACAGGTTCCACCAACTTTGAACCAGTTCACCAAGACCCTTGA 429 0.4103 FVGKENPSIILSEKLIVFPVHLDENVYNGALNFNPWRWMEPENEKRIRRISPFYAPFGGGARFCPGAELVRLQIALFLHYFVTTYRLLNEEKVTNPLLEKLPKQFGIKGALLPKRDLTRFEEEDPQLEVTGSTNFEPVHQDP* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1887 142 Gene3D Cytochrome P450 15 101 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1887 142 PRINTS E-class P450 group IV signature 64 82 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1887 142 PRINTS E-class P450 group IV signature 48 64 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1887 142 PRINTS E-class P450 group IV signature 21 39 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1887 142 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 57 66 IPR017972 GO:0005506|GO:0016705
Amo02g1887 142 PANTHER CYTOCHROME P450 SUPERFAMILY PROTEIN 19 95 - -
Amo02g1887 142 MobiDBLite consensus disorder prediction 122 142 - -
Amo02g1887 142 Pfam Cytochrome P450 18 100 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo02g1887 142 PANTHER CYTOCHROME P450 26 19 95 - -
Amo02g1887 142 MobiDBLite consensus disorder prediction 127 142 - -
Amo02g1887 142 SUPERFAMILY Cytochrome P450 17 97 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1887 Amo-Chr2 60324916 60327619 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1887 20 116 Cytochrome P450 AT1G73340 57.000 3.24e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1887 - - adu:107490401 134.42