Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1886 ATGCCAACTAGCACTACTACACCTTATAAAAAGGAGCAGCCCTTGCCCCTTTCTTTACCTATATCATCACATCATCCATCTAAGTACCTTATTCTCTATTGCCATTCTAAAATCAAAACACACACTTGTCTTGGATTAGTTTCATTCCTTTCCCTCCAAGAAGTTAATCAATTAATGGCGTCTAGCTCAATGCAATCTTCGTCATCGTGGAGTGCTAAGGACAACAAAGCCTTTGAGAGGGCTCTGGCTGTTTACGACAAGGACACCCCTGACCGATGGTACAACATTGCCCGCGCCGTCGGCGGGAAAACCCCGGAGGATGTGAAGCGGCACTATGAGCGTCTTGTTCATGACGTTAGGCACATTGAGTCAGGGCAAGTGCCATACCCAAATTACAAGAAGAGTGGAGGCAGAGAGAAACCTGATGCTCCGTTCCATTCATTAATTGGCATAAGAAACAAAGAAATTCAGAATCTCACTATTATCCAACTACTCTAG 498 0.4458 MPTSTTTPYKKEQPLPLSLPISSHHPSKYLILYCHSKIKTHTCLGLVSFLSLQEVNQLMASSSMQSSSSWSAKDNKAFERALAVYDKDTPDRWYNIARAVGGKTPEDVKRHYERLVHDVRHIESGQVPYPNYKKSGGREKPDAPFHSLIGIRNKEIQNLTIIQLL* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1886 165 Gene3D - 60 129 - -
Amo02g1886 165 ProSiteProfiles Myb-like domain profile. 62 116 IPR001005 -
Amo02g1886 165 CDD SANT 76 116 IPR001005 -
Amo02g1886 165 ProSiteProfiles SANT domain profile. 65 120 IPR017884 -
Amo02g1886 165 SMART sant 66 118 IPR001005 -
Amo02g1886 165 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 59 140 - -
Amo02g1886 165 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 59 140 IPR044636 GO:0003700
Amo02g1886 165 SUPERFAMILY Homeodomain-like 68 124 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1886 Amo-Chr2 60313065 60313807 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo02g1886 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1886 - - ahf:112719426 270.396