Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1844 ATGGAGTCGCACGAGTACGATTTTCAGGAAGATGATACAGAACACGACCATCATGCAGACGCTGATGTCGACAATGGGGATGCATTTGAATTGGAAGACAATTTGGACGGCGCCGGAGGAATGTCTGACAATTATGCGGACGACGAATTTTACGCTGTTGATTCCGGCGAGTCGATAGGTTGGGTTGATTTTTTAAATTTGAGTGAGGAGGATGTTCTTCAGTTTAATTTCGCAGATGTTGACATTGCATTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTTCGACGCGAGACGTTCCAGAAGGTACCGATCCCCGAAGTTCTACTCGATGCTTAACCGGCAAAAGAGGCCGAGGGCCGAGACACGGTGTGGATGCCCTGCAAGGATGCTACTCCGCATGGACGATGAATCAGGACGTTGGCACGTTGCGTACTTTTCAGACGCGCATAACCACCACGTTCTTAAGTTGCGATTTTCTTCCATGCTCCTGGGCCATCGGAGGATGAGCGAAGCGGACATCGAGCAGATGAACGACATGCGCAAAGGGGGCATTGGCTCTCGATACAGTTACACTGAGTTTTTACGTCATTTCCATCGATGCTTGATGTTCGTGCGCGCAAAGGAGGTGGAGGCTGATTTCGAGTGTGCAAAGGGTGACCCTGTTATGACCACCAACCTGAAACAGCTGGAGCGGAGTGCAGCCGACAACTACACTCGTGCGATATTCTATTTGTTTGTTCCCATTCTTGACAGGGCCTGTGCAATGAGGGTGGTTGACTCTGAAGACAACGGTTCCTATTTTATCCACACCATCTCTCGATACGACACTCCGGGGAAGGATTGGCGTGTTGTTGCAACGTCTGATACGAGGGAGGTCCGATGCACGTGCATGAGAATGGAATGTTTTGGGGTCCCCTGCGAACATATAATTGCGGTGCTTGTTCTTAACAATGTTCATGTGATCTCAAGGTCTCTGATATTGCCGAGATGGACCAAGGATGCAAAACTTGTGGCGGTGCAGTCGATGGGCGTGATTTGGGATTCTGTACAACTGACGCAACACTGGTGCCTGATGGATTGGTACCAGAAAGTGTGCAAGATTGCATGTCACAGCACCGAAAAGTTCCAGTTTGCAAGAGACATTGCCGTGCTGATGCTGAAGCACTTCGAGAACGAAGATGCAGGGGACACCAGTTTTTCACCTGAGGGGCCACCTACTGAGGGTGGCAGAGCCCCGGTGCGGAATCCACTCAGGCGCAATACAAAGGGTAACGGTGCTCATGGTGGAAAGAAAACCCAGCGATGTCGTTTGTGCCGGGAGGTGGGACACAACAGGACTACGTGTCCGGACCGCCGCACAATGGAATCATCCAACGCAGTTACAGATGGCATGGATTCGATGGACACTGACATGGTGGGTTAG 1428 0.507 MESHEYDFQEDDTEHDHHADADVDNGDAFELEDNLDGAGGMSDNYADDEFYAVDSGESIGWVDFLNLSEEDVLQFNFADVDIAFEFYQQYAKHHGFDARRSRRYRSPKFYSMLNRQKRPRAETRCGCPARMLLRMDDESGRWHVAYFSDAHNHHVLKLRFSSMLLGHRRMSEADIEQMNDMRKGGIGSRYSYTEFLRHFHRCLMFVRAKEVEADFECAKGDPVMTTNLKQLERSAADNYTRAIFYLFVPILDRACAMRVVDSEDNGSYFIHTISRYDTPGKDWRVVATSDTREVRCTCMRMECFGVPCEHIIAVLVLNNVHVISRSLILPRWTKDAKLVAVQSMGVIWDSVQLTQHWCLMDWYQKVCKIACHSTEKFQFARDIAVLMLKHFENEDAGDTSFSPEGPPTEGGRAPVRNPLRRNTKGNGAHGGKKTQRCRLCREVGHNRTTCPDRRTMESSNAVTDGMDSMDTDMVG* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1844 475 MobiDBLite consensus disorder prediction 451 475 - -
Amo02g1844 475 MobiDBLite consensus disorder prediction 1 24 - -
Amo02g1844 475 PANTHER OS01G0607050 PROTEIN 176 395 - -
Amo02g1844 475 PANTHER OS01G0607050 PROTEIN 73 157 - -
Amo02g1844 475 Pfam FAR1 DNA-binding domain 114 156 IPR004330 -
Amo02g1844 475 ProSiteProfiles Zinc finger SWIM-type profile. 283 319 IPR007527 GO:0008270
Amo02g1844 475 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 73 157 IPR031052 GO:0006355
Amo02g1844 475 SUPERFAMILY Retrovirus zinc finger-like domains 423 457 IPR036875 GO:0003676|GO:0008270
Amo02g1844 475 MobiDBLite consensus disorder prediction 396 435 - -
Amo02g1844 475 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 176 395 IPR031052 GO:0006355
Amo02g1844 475 Pfam SWIM zinc finger 293 315 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1844 Amo-Chr2 58314729 58317009 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo02g1844 FAR1 4.9e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1844 - - adu:107493880 563.148