Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1813 ATGGAGTTCAAGGTTGAGATTCAGGAGTTAGAGGGAAGTGCCAACCATGTGTTCGATGAAATGTCTGGGAGAATGGGTGAGATTTCTTGTGATAGGAATAAAGGTGGGGTTGGTGAGGGAGTTGATGGAGTTGTTGGGAAGTGTAATGGGACCTCAAAGGTGAGAGCTTTTGGGTTGTTGGTGAGGTCACATTCTACAGGTCACTCTCTTGTGGAACCGGGGAAGAGTTTGGAGAGTTTCACTTTGAGGTTGCCTGAGGAATTGAGGAAGCAGATTCTGGAAGCCAATCATAAGTTTAGTGGTGGTAGTGGTGGGATGAAGCATTCGGCAAGCTACGACGTCGTTTTGCAAAGTGAAGTTGGTGAAGGTAGTAGTAGTAATAAGGGGAGTAAGAATAGTAGGTGGGTGCTGTCTATGACACCTCCATTTGTTTTTCGCGGTTGGGGTCATTTTAGTACTTCTTCTGGTTTGGCACCGCCAAATGAGTACTCAACATGCTCTGGGATTCCTAGGCTTTGGGGTTCTTCAGCGGCAAGGGAAGAGAAAGGATGTGAAGGGAGAGAGGGTTTGCAACTGGTATGA 582 0.4691 MEFKVEIQELEGSANHVFDEMSGRMGEISCDRNKGGVGEGVDGVVGKCNGTSKVRAFGLLVRSHSTGHSLVEPGKSLESFTLRLPEELRKQILEANHKFSGGSGGMKHSASYDVVLQSEVGEGSSSNKGSKNSRWVLSMTPPFVFRGWGHFSTSSGLAPPNEYSTCSGIPRLWGSSAAREEKGCEGREGLQLV* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1813 193 PANTHER RING FINGER DOMAIN-CONTAINING 48 118 - -
Amo02g1813 193 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL31-LIKE 48 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1813 Amo-Chr2 57422343 57422924 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1813 62 146 Rapid Response to Elicitors AT3G05200 35.870 4.58e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1813 K10664 - aip:107636030 187.963