Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1803 TGTTTTGTATTTGGAATTTTCAAGAGCAGTGTTACTGTTGATAATATCACTATTGAAGGTTGCAATTTGAATTTTTTATTCACAGCAACGAGGCAATCGAAGATCGTGCCTGTGCTTAGAGATTGTTCGTTTCGCATTCCTTGTGGGCAGTTTTGGATGCTTCTTGGACCAGATGGGTGTGGAAAATCTACCCTCTTGAAGCCAATGTTGCAGATTTTGGCTGGTCTATTGAATCCAACTTCAAGAACAATGCATGTGAATGAACCTAAGAGTTTTGTTTTTCAAAATCCTAACCATCAGGTGGTGATGCCAACCGTAGACGCCGATGTTACATTTGGTCTTGGTAAGTTCAGCTTGACTAATGATGAAGTAAGGTCTAGGGTATTATTGAGAGCCTTGCATGCTGTAGGCCTCTCTGACTACGAGAAGCAAATATCCGAGTTAATTTTGAGTGGTGGTCAGAAGCAGAGGGTTGCGATTGCCGGTGCTTTAGCAGAAGCTTGTAAAGTCGGACTTATCAAGGCTGTTAGAAACTCTTTGGATACCTCTGCAGAAGTGACAGCATTATGGGTGATCCATCGTTTGGAAGAACTAGAATATGCATGTGATGCCATATACATGGAGGATGGGAAAGTTGTCAAATATGGAGATGCAGCTAGCATTAGGAGTTTCATTGAAGCCAAACCATCTGAATATCTTTCAAATGCATATTAG 714 0.4118 CFVFGIFKSSVTVDNITIEGCNLNFLFTATRQSKIVPVLRDCSFRIPCGQFWMLLGPDGCGKSTLLKPMLQILAGLLNPTSRTMHVNEPKSFVFQNPNHQVVMPTVDADVTFGLGKFSLTNDEVRSRVLLRALHAVGLSDYEKQISELILSGGQKQRVAIAGALAEACKVGLIKAVRNSLDTSAEVTALWVIHRLEELEYACDAIYMEDGKVVKYGDAASIRSFIEAKPSEYLSNAY* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1803 237 Gene3D - 13 233 IPR027417 -
Amo02g1803 237 CDD ABC_cobalt_CbiO_domain1 27 211 IPR015856 GO:0005524|GO:0016020|GO:0055085
Amo02g1803 237 ProSitePatterns ABC transporters family signature. 150 164 IPR017871 GO:0005524
Amo02g1803 237 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 18 234 IPR003439 GO:0005524
Amo02g1803 237 Pfam ABC transporter 39 171 IPR003439 GO:0005524
Amo02g1803 237 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 15 234 - -
Amo02g1803 237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 224 IPR027417 -
Amo02g1803 237 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 15 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1803 Amo-Chr2 57262731 57264377 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1803 36 216 Calmodulin-binding Proteins AT2G36910 25.238 1.69e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1803 - - ccaj:109809809 311.997