Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1795 ATGCCGCAAGGAACCCTTGAAGTCCTTCTTGTCAGTGCCAAGAAACTTGAGAATACTGATTTTCTTTGTAAAATGGACCCCTTCGTGATTCTCACATGCCGTACTCAGACGCAGCAAAGCAGTGTTGCATCAAACCAGGGAACGAATCCAGAATGGAATGAGACGTTTGTGTTCACCGTGTCTGAAGGCGTTAAAGATATCCATTTGAAGATCATGGACCAAGATCTCGGCACACGTGATGACTTTTCAAAAGATTTGGGCTGGAATGTGTTAAAACTTATGGGAAAATTTCTTATGCATCAATATCAAGCTAACAAAGATGAAAGTACTAGGGTCATGAAGGTCTTTCGGCAACAAAAACAGTTGAACGAGAGTTTTCATTCTATAATTTTTTTTTTTTTTTTTATTTAA 411 0.3869 MPQGTLEVLLVSAKKLENTDFLCKMDPFVILTCRTQTQQSSVASNQGTNPEWNETFVFTVSEGVKDIHLKIMDQDLGTRDDFSKDLGWNVLKLMGKFLMHQYQANKDESTRVMKVFRQQKQLNESFHSIIFFFFFI* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1795 136 Gene3D C2 domain 2 128 IPR035892 -
Amo02g1795 136 SMART C2_3c 5 106 IPR000008 -
Amo02g1795 136 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 82 IPR035892 -
Amo02g1795 136 PANTHER C2 DOMAIN-CONTAINING 1 84 - -
Amo02g1795 136 Pfam C2 domain 4 82 IPR000008 -
Amo02g1795 136 PANTHER OS02G0640000 PROTEIN 1 84 - -
Amo02g1795 136 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1795 Amo-Chr2 56636455 56639703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1795 4 82 C2H2 Transcription Factor Family AT4G21160 30.380 7.71e-06 42.4