Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1759 ATGCCTCCTCCATTTGATATGATTTCTAAGATGCATCCTCCTAGAGAGGCTTGGAGGCTGAAAGTTAGGGTTCTAAGGCTTTGGGTTGTACCCTCTTTTGGGAAGCATGATATTCCTAACTCAATGGAGATGATTCTCCTTGATGAGCATTGTGGAAAAATTCAAGTTACAGTTAAAAAATCACTCCTTAATAGGTTTAGGGATCATATAGTTGAAGGTCAAGTTTATAGAATGACATACTTTACTGTTGTGTCAAATCATGGAAGTTATAGAACAACTTCTCATGAATTCAAATTGGTTTTTCTTCACCGAACCACTGTTGTAGCTGTTGATGAAGATGTTATCCCTAAGACTTATTTCAACATGTTTTCTTTTTCTGAGCTGCTGAACATAACCCAAGATTATGATTTTTTAGTTGATATCATTGACCTTTTAACTTCAGTGGGAGAAGAGAAAGAATATGCAAAAGAGGGGAACATTGTGAAAATAATTGTGCTTAAATTAAGTTCAAAAGATCTTACAGTGCGATGTGCATTGTTTGGGGACTATGTTAATCAAGTAAATAATTTCCTTGCCTCTGGCTATGTGGAGCAGCCTGTTGTAGTGATTCATCTGTGGCTTAATGGGGAAAGCAACTTACAAAGTGTTGAAATTGTTGATGAATTCATCTGTGCTGAGCTACCTAATCCCCTTAAATTTCCAGCTCTTTATAATATCGTCACCAAATTTGCTGACATGTTTACGGGTTGGATGATGGCCAACATGCGGTTCCCGGGTGGGCGGTCTTTAACATATGTTGAATATCCAGGAAAATTTGTCTATTGTTCAAACAGTAGGGAGTGGAAGCCGAGACAGAGGGGATTCTCAATTGGAAGATTGAGTTTTGCTCATCCCTCATCTGGTGAACTTTTCTATATGCGGATGCTTTTGAATGAGGCATGTTCTGCCATGGGATTCTTGATAGATGATAAGGAGTATGTTTCTGCTATTAAGGAAGTCGCCGAGGTAGTGTCCGCTGCACAGATAAGAAGGCTTTTTGTGATGTTATTGCTATCTGGTTCCATGGGAAGGCCTCTGTCAGTTTGTGAACAAACTTATGCTTATTTGTCTGATGATATTCTTTATCGCAGAAGGCATGAGCTGCAATATCCTGGTAAGAATTTTATTCATGGTGATTTTATTATATGA 1188 0.3838 MPPPFDMISKMHPPREAWRLKVRVLRLWVVPSFGKHDIPNSMEMILLDEHCGKIQVTVKKSLLNRFRDHIVEGQVYRMTYFTVVSNHGSYRTTSHEFKLVFLHRTTVVAVDEDVIPKTYFNMFSFSELLNITQDYDFLVDIIDLLTSVGEEKEYAKEGNIVKIIVLKLSSKDLTVRCALFGDYVNQVNNFLASGYVEQPVVVIHLWLNGESNLQSVEIVDEFICAELPNPLKFPALYNIVTKFADMFTGWMMANMRFPGGRSLTYVEYPGKFVYCSNSREWKPRQRGFSIGRLSFAHPSSGELFYMRMLLNEACSAMGFLIDDKEYVSAIKEVAEVVSAAQIRRLFVMLLLSGSMGRPLSVCEQTYAYLSDDILYRRRHELQYPGKNFIHGDFII* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1759 395 Gene3D - 114 217 IPR012340 -
Amo02g1759 395 PANTHER UNCHARACTERIZED 237 382 - -
Amo02g1759 395 CDD RPA1_DBD_A_like 19 107 - -
Amo02g1759 395 Pfam Domain of unknown function DUF223 43 130 IPR003871 -
Amo02g1759 395 SUPERFAMILY Nucleic acid-binding proteins 3 112 IPR012340 -
Amo02g1759 395 PANTHER ATP-DEPENDENT DNA HELICASE 237 382 - -
Amo02g1759 395 Gene3D - 4 112 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1759 Amo-Chr2 54661370 54663480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1759 2 219 Core DNA Replication Machinery Family AT5G45400 21.586 5.01e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1759 - - ahf:112717561 366.311