Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1756 ATGGCAATGTTAATTACCGTTGCTCAATGGGAAGTGATTGGTGTATCCGCAATTGACCCGATTGCAGCCACGGGAAAAGAACCAATCATTGAGTTGTACATGCACGACATTCAAGGAGGAAGCAGCCCAACAGCTAGGCCGGTTACCGGCTTGCTGGGCAACATTTACAGCGGGCAAGTGCCTTTTGCGATGCCAATAGGATTCAACATCCCGCAAGGTCAGACTGCTGTCCCCAATGCCAATGGTGCTCTTCCAACTGTCAACGGAGTATTCGGGATCCCACTTGGAACCGGCTTGGCTGGTACAAGCTTTGCAGGAGACTCAGGCAACAATAACAACCAGAATAATGCCCAGTTGCAGTTAGGACCTGATGGTTTGGGACTTGGTTTCGGCACAATCACTGTAATTGATGATGTTTTAACGGCTCAACCAGAGCTGGGGTCACAAATAGTTGGGAAAGCTCAAGGAGTGTACGTGGCGAGTTCGGCAGATGGGAGTAGACAGATGATGACATTTACCGCCTTGTTCGAAGGAGGGGAGTATGGAGACAGCCTTAACTTCTATGGCCTCTACAAGATAGGGAGCACCATGTCGCAGTTATCAGTGATCGGGGGCACAGGAAAGTTCAAGAACGCAAGCGGTTTTGCAGAGCTCAGAGCTCTTATRCCCCCAGGACAGATGACTGTGAGATTGGTCTTGTATTTTGTCAGTTTGTTGCAGAATGTATCAGAAATCTTCATTGTAACCCCAAGAACCATATGTGAAATTGAAGGAGCTTTCTTCGCTGGGGAAAGTATCTTCTGGACCTTGATGGACCAGGTATTCACATTCGTTCTCCGCAAATCCGGCGCCCAGTGGACTGTGAAGCAGCACTCCGGCGACATCGAGGACTCCGCCTCCTCCACCTACGACCTTCAACGCAAGCTCGTCAATGCCGCTCGCGCCGCTGATTCCTCCGGCGCCGTTCAGTCCTCTTTCTCTTTCGTTTCTCCCTCCTCTGCTGTCTTCCAGGTGGTTGTGGGTGGTGCAGTCTTCGTTGGAGGTGGTGCTGTTACTGCTGCTCCTGCTGGTGGTGCTGCCGCAGAGAGCGCCGCCGCCCCTGCTGCCGAGAAGAAAGAAGAGAAGGTCGAGAAAGAGGAAGACGAAGATTTTGGAATGTCACTCTTTGATTAA 1173 0.5115 MAMLITVAQWEVIGVSAIDPIAATGKEPIIELYMHDIQGGSSPTARPVTGLLGNIYSGQVPFAMPIGFNIPQGQTAVPNANGALPTVNGVFGIPLGTGLAGTSFAGDSGNNNNQNNAQLQLGPDGLGLGFGTITVIDDVLTAQPELGSQIVGKAQGVYVASSADGSRQMMTFTALFEGGEYGDSLNFYGLYKIGSTMSQLSVIGGTGKFKNASGFAELRALXPPGQMTVRLVLYFVSLLQNVSEIFIVTPRTICEIEGAFFAGESIFWTLMDQVFTFVLRKSGAQWTVKQHSGDIEDSASSTYDLQRKLVNAARAADSSGAVQSSFSFVSPSSAVFQVVVGGAVFVGGGAVTAAPAGGAAAESAAAPAAEKKEEKVEKEEDEDFGMSLFD* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1756 390 PANTHER DIRIGENT PROTEIN 1 228 - -
Amo02g1756 390 MobiDBLite consensus disorder prediction 367 382 - -
Amo02g1756 390 MobiDBLite consensus disorder prediction 362 390 - -
Amo02g1756 390 PANTHER DIRIGENT PROTEIN 24-RELATED 1 228 IPR004265 -
Amo02g1756 390 Gene3D - 107 252 IPR044859 -
Amo02g1756 390 Pfam Dirigent-like protein 115 231 IPR004265 -
Amo02g1756 390 Pfam 60s Acidic ribosomal protein 338 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1756 Amo-Chr2 54646261 54648118 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1756 274 339 Cytoplasmic Ribosomal Protein Gene Family AT5G57290 69.697 1.29e-24 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1756 - - aprc:113871540 369.777