Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1727 ATGCTTGCTAATGGAGCCAATGCACAGAACAATGCCATAACTCAATCTTCTGGAAAGGCTGCTGTGTCAATGGCTGCAACTAATCTTAATATTGGAATGGACTTGTGGAATGCATCTTCTGCAAAGGCTGATGCTACGAAACTGAGAAACAATCAACCTGCCCTAGGAGCTGTCAACCCTCCTACTATAATGGGACGTGAAGTTGCACTTGGTGAACAGTGGATACAAGACGAACGTGACCTGAAGAGACAGAAAAGAAAACAGTCTAACAGAGAATCAGCTAGGAAGTCAAGACTACGCAAGCAGGCTGAGTGCGAGGAGTTGCAAAGAAAGGTGGAGTCACTGGGAAACGAGAGCCAGACTCTGAGAGAAGAACTTCAGATAGTATTAGAAGAATGCAAGAAGCTTACTGCTGAAAATAATTCCATCAAGGAAGAGTTGGAAAGGTTATGTGGACCAGAAGCAATTGCCAGCCTCGAATAA 483 0.4431 MLANGANAQNNAITQSSGKAAVSMAATNLNIGMDLWNASSAKADATKLRNNQPALGAVNPPTIMGREVALGEQWIQDERDLKRQKRKQSNRESARKSRLRKQAECEELQRKVESLGNESQTLREELQIVLEECKKLTAENNSIKEELERLCGPEAIASLE* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1727 160 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 160 IPR044827 GO:0003700|GO:0006355|GO:0043565
Amo02g1727 160 SUPERFAMILY Leucine zipper domain 81 136 IPR046347 GO:0003700|GO:0006355
Amo02g1727 160 Coils Coil 91 146 - -
Amo02g1727 160 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 80 143 IPR004827 GO:0003700|GO:0006355
Amo02g1727 160 SMART brlzneu 78 142 IPR004827 GO:0003700|GO:0006355
Amo02g1727 160 CDD bZIP_plant_GBF1 83 133 IPR045314 GO:0003700|GO:0006355
Amo02g1727 160 MobiDBLite consensus disorder prediction 78 103 - -
Amo02g1727 160 Gene3D - 81 133 - -
Amo02g1727 160 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 85 100 IPR004827 GO:0003700|GO:0006355
Amo02g1727 160 PANTHER G-BOX-BINDING FACTOR 1 1 160 - -
Amo02g1727 160 Pfam bZIP transcription factor 78 140 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1727 Amo-Chr2 53991114 53992042 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1727 1 160 bZIP Transcription Factor Family AT4G36730 46.875 2.86e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo02g1727 bZIP_1 1.1e-17 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1727 K09060 - gmx:547788 234.958