Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1684 ATGATGAACATGGACATGGACATGCCCCTTCCTGAAGAGCTCGAACTGCTCGAGCTCGAAAGGGACTACCCAGATTTTGACATCCCCGAACCCGAACAGGAACAGGAATTGCAACCGCAAAAGCAACCGCAAACGCACCCGCAACCAGAATCGCCAGATCTGGTGGTTCTTCCAGAACCCCAATCCAATGGCCACAAGCGGTCGCGTTCCGACGATCCTTCTCCAGTCAGGTCGCTTTCCGAGGAGAAGCGGGTTAGGGTTGGCGATTCTGCTGCCTCTGAGGTTGATGCAGTTTCCAATGACGATGAGGACTGGCTTCAATACTCACCTCCTCCTAGAGGCGTTCGAATGGAAGAAGAAGATAGGTTTGTGAAGGAGAAGGAGCTGTCAAGGTACGCTTGGGAGATCCACGGGGAGTGTATGCCGGTTACTGCGCCTAGCGGCGATAGAGTTTACGCAAAACTGAACCGCATTGAAGGGTTGGAACTCGCTAGGAAGTTGGACTGGAGAGCCAATTCTGCTGATCTAACTTTAGAACCTATTAATGCTCTCTTCGAAAGATTGGAGCAAGAGGCTATCGCTAAGACCATGGAAGCTAGTTTGGAGGGCCAAARCTATCTAGATGTTCCTGCAACACAAATGGTGCATGAGCAACTTTGGGTAGATAAATATGCACCAAAGTCATTTACTGAGCTTCTTAGTGATGAACAAACAAATCGCGAGGTACTCTTATGGTTGAAACAATGGGACTCTGTTGTTTTTGGATCTGATATTCGAAGTACATCAGATGATGTTTTGTTTGCTTTGAAGAGACATTCTTCTGTTGCCCAAAATCAGCGACCTTTCAATTCAAAGTTTTCAAGGAGAAACAGAGGAGCCAAATGGAGTAGTGGGAGGTATAAAAATTCAAGAAGTATGGATGGGAGTAGTAACTCACAGAGCATTGAGGATATACTGAATACAAGGACAACCAATGTTGGTCCACCAGAACAGAAGATCCTTCTGCTCTGTGGATCACCTGGTCTTGGAAAAACAACAATTGCCCATGTAGCTGCCAGGCACTGTGGATATCATGTAGTGGAGGTTAATGCTAGTGATGATCGTTCTACATCAACTATTGAATCCAAAATCCTTGATGTTGTTCAAATGAACTCTGTCTTGTCTGATTCAAGGCCAAAGTGTCTGGTGGTGGATGAAATTGATGGAGCCCTTGGTGAAGGCAAGGGTGCTGTGGAGGTTCTTTTGAAGATGGTTTCTGCTGAAACAAAGTCTGATGCTGGAAGGAAATCGTCAAAGAAGGGGTGGAAAAGAGCAACATTATCAAGACCTGTGATTTGCATTTGTAATGATTTATATGCACCTGCCTTAAGACCGTTACGTCAGATAGCCAAGGTTCATATGTTTGTTCAGCCAACAGTTGGTCGTGTGGTAAGCAGGCTTAAATATATATGTAACAAGGAGGGAATGAAAGCTAGCGCTATTGCGCTCACTGCTCTAGCAAATTACACAGARTGTGATATACGCTCATGCTTGAATACTCTGCAATTTCTCTCCAAGAAAAAGGAAACCCTCAATATGTTTGATTTAGCTTCTCAAGTAGTTGGCCAGAAGGACRTGTCAAAGAATGTTATAGACATCTGGAAGGAGATTTTCCATAGGAAAAGAAAGAAGTTGGAAAGAAATTCACCTAAAAGCAAGTCTTTTGAATTTGATTCCTTGTACTCCCTGATATCAAACCGAGGTGATAGTGACTTGATTTCGGATGGAATTCATGAAAATATTTTGCKTCTCAATTATCATGATCCCGTGATGCAAAAAACTGTCAAGTGCTTCRATATTCTTGGAGTTTTTGATCTATTGCATAAATTCATATGGCGTACACAACAAATGCCCCTTCATGGTAAGAAGAGAAATAATTTCAATAGATATTGTTGCAAAACATATTTCATTCACATTTCTGTTCTGTCTYCAYTAGTATATTTGCCGCCCATAGCAATTGGTGTACATCATATAGTAGCTCAAGTTCAGAAGCCAAGCATTGAGTGGCCAAAGTCTTATCAAAGGTATCGAACAATGATGTCTGAGAAGATTGACATTTTGAATACTTGGCAYTACAAAGTCCCACCACATATTGCAAGGCACCTATCAGTTAGTTGCATTGTTGAAGATATAATTTCTCCRTTGTTGCATATTCTGTCTCCACCAACGATAAGACCGGTGGCATTACATCTCCTAGCTGAAAAGGAGAAGAACGATTTTTCTCAGCTAGTTAGTACAATGGTCTCTTACTCTATAACATACAAGACTACAAAGTCAGAAATGCTGCCTAATCACCTAAGGCATGAAGTAGCAAATGACATGGCTGTGTCTCTTGTTCCCCCAATCAATGACTTCATAAACTTTAAGGAMTATGCCTCCAATCATCACACCCTTTCATTACCTATGAAGAAGGTTTTGCTCCATGAATCTTGCACTCCTGTTCCAACAATTGGGTTTCAGGTTGAAAAACAGAGAATCTTGCAAGTTACAAAGGGAGATGAAGTTTTTGCTAWTGGAACTATCAATGCTCAATCAACCAAAGCCAACCATGGAGCTGCAGCTGATAAGAAAACCACTGAAACAAATACTAACATTTTAGCGAGGCAGTTAAATGCAAATCCCAAATCAGATTCACCAAACTYGAATCTTAATAAAGTTCCATGTGTTTTAGACAACGCAAAACTGCCAAACACGGGAAACAAGAAAAGGCCATCTAATGGKTTTTCAAGTTTCTTTGACAGAATACAATTTACAATAATAGATCACTATTTTATCTTAGAAGCTCACGTATTAGAACTTGAAAAAACACTTGAAAAGTATGTTAAAACTGGAATATATAACTGGAAATTCTCGAAACTTCTCCACTCTCGTTCCAGTAATTACATTTTGCTTCTTACTTTTCCAATTCTCTAA 2952 0.4096 MMNMDMDMPLPEELELLELERDYPDFDIPEPEQEQELQPQKQPQTHPQPESPDLVVLPEPQSNGHKRSRSDDPSPVRSLSEEKRVRVGDSAASEVDAVSNDDEDWLQYSPPPRGVRMEEEDRFVKEKELSRYAWEIHGECMPVTAPSGDRVYAKLNRIEGLELARKLDWRANSADLTLEPINALFERLEQEAIAKTMEASLEGQXYLDVPATQMVHEQLWVDKYAPKSFTELLSDEQTNREVLLWLKQWDSVVFGSDIRSTSDDVLFALKRHSSVAQNQRPFNSKFSRRNRGAKWSSGRYKNSRSMDGSSNSQSIEDILNTRTTNVGPPEQKILLLCGSPGLGKTTIAHVAARHCGYHVVEVNASDDRSTSTIESKILDVVQMNSVLSDSRPKCLVVDEIDGALGEGKGAVEVLLKMVSAETKSDAGRKSSKKGWKRATLSRPVICICNDLYAPALRPLRQIAKVHMFVQPTVGRVVSRLKYICNKEGMKASAIALTALANYTECDIRSCLNTLQFLSKKKETLNMFDLASQVVGQKDXSKNVIDIWKEIFHRKRKKLERNSPKSKSFEFDSLYSLISNRGDSDLISDGIHENILXLNYHDPVMQKTVKCFXILGVFDLLHKFIWRTQQMPLHGKKRNNFNRYCCKTYFIHISVLSXLVYLPPIAIGVHHIVAQVQKPSIEWPKSYQRYRTMMSEKIDILNTWHYKVPPHIARHLSVSCIVEDIISPLLHILSPPTIRPVALHLLAEKEKNDFSQLVSTMVSYSITYKTTKSEMLPNHLRHEVANDMAVSLVPPINDFINFKXYASNHHTLSLPMKKVLLHESCTPVPTIGFQVEKQRILQVTKGDEVFAXGTINAQSTKANHGAAADKKTTETNTNILARQLNANPKSDSPNXNLNKVPCVLDNAKLPNTGNKKRPSNGFSSFFDRIQFTIIDHYFILEAHVLELEKTLEKYVKTGIYNWKFSKLLHSRSSNYILLLTFPIL* 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1684 983 MobiDBLite consensus disorder prediction 64 90 - -
Amo02g1684 983 CDD AAA 329 461 - -
Amo02g1684 983 CDD HLD_clamp_RFC 471 526 - -
Amo02g1684 983 Gene3D - 217 470 IPR027417 -
Amo02g1684 983 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 4 633 - -
Amo02g1684 983 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 647 928 - -
Amo02g1684 983 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 528 IPR027417 -
Amo02g1684 983 SMART AAA_5 330 474 IPR003593 -
Amo02g1684 983 Pfam ATPase family associated with various cellular activities (AAA) 334 450 IPR003959 GO:0005524|GO:0016887
Amo02g1684 983 MobiDBLite consensus disorder prediction 35 49 - -
Amo02g1684 983 MobiDBLite consensus disorder prediction 281 323 - -
Amo02g1684 983 Gene3D - 471 542 - -
Amo02g1684 983 MobiDBLite consensus disorder prediction 1 113 - -
Amo02g1684 983 MobiDBLite consensus disorder prediction 14 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1684 Amo-Chr2 51871292 51891319 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1684 331 518 Core DNA Replication Machinery Family AT5G22010 30.542 2.81e-14 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1684 K11269 - gmx:100785041 1157.51