Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1674 ATGACTGAACTCGCTAATAATGGCCGTGACTGCTCTTCCGTCACCGTCAACTTCACCAAGCTATTCATTAATGGGCAGTTTCTTCATTCAGTTTCAGGGAAGACATTTGAGACAATAGATCCAAGAACAGGAGAGGTGATAACAAGAATTAGCGAGGGAACCAGAGAAGACATAGATATTGCTGTTAAGGCTGCACGCCACGCATTTGACTTTGGTCCATGGCCTCGCATGCCTCCCTCTGAGAGAGCAAAGATTATGATGAAATGGGCAGAACTAATTGATGAAAACGTGGAAGAACTTGCGGCACTAGATACTATTGATGCTGGAAAATTGTATCATATGTGCAAGGCTGTGGACATTCCTACAGCATCAAACACTCTACGCTACTATGCTGGTGCTGCTGACAAAATCCATGGGGAGGTGTTAAAGATGTCTGGGAAGTTCCATGCATACACATTGATGGAACCAATTGGTGTTGTTGGACACATCATTCCATGGAATTTCCCAACCACCATGTTCTTCCTTAAAGTTAGCCCTTCCTTGGCTGCAGGCTGCACCATGGTACTCAAGCCTGCAGAGCAGACACCACTCTCTGCTCTGTTTTATGCTCATCTAGCCAAACTGGCTGGAGTTCCGGATGGAGTGCTTAATGTAGTTCCCGGATTCGGTCCAACTGCTGGTGCTGCAATAAGCTCACACATGGACATTGATAAAGTTAGCTTCACAGGTTCAACAGAAGTAGGGCGTGAAATAATGCAAGCTGCAGCAAAGAGCAACTTGAAACAAGTGTCACTTGAATTAGGAGGAAAATCACCTCTCATTATCTTTGATGATGCTGATATTGACAAAGCTGCTGACCTTGCTCTCTTGGGCATCCTATTTAACAAGGGAGAAGTCTGTGTTGCAAGTTCGCGTGTGTTTGTTCAGGAAGGTATCTACAATGAATTTGAAAAGAAGCTAGTAGAGAAGGCAAAAGCATGGGTTGTTGGGGATCCTTTTGACCCTAAATCTCAGCAAGGACCTCAGGTTGACAAGAACCAATTTGAAAAAGTCCTTTCCTACATTGAACATGGAAAGAGACAAGGTGCTACCCTGTTGACTGGGGGTAAAACACTGGGCAACAAGGGCTATTACATTCAACCAACAATTTTTTCTGATGTGAAGGAGGATATGCTTATAGCACAAGATGAAATATTTGGCCCTGTGATGGCACTCAAGAAGTTCAAGACGATTGAGGAAGCAATTAAGAGTGCAAACAACACAAGATATGGGTTAGCAGCGGGGATAGTGACAAAGAACATAGACACAGCAAACACAATGTCACGGTCCATTCGTGCAGGGACTATTTGGATCAATTGCTACTTTGCGTTTGGGGATGATGTTCCTTTTGGAGGGTATAAGATGAGTGGATTTGGAAAAGATTCCGGATTGGATGCACTTCACAAATACCTACAAGTTAAATCTGTTGTCACACCTATTTACGATTCTCCTTGGCTTTGA 1500 0.4373 MTELANNGRDCSSVTVNFTKLFINGQFLHSVSGKTFETIDPRTGEVITRISEGTREDIDIAVKAARHAFDFGPWPRMPPSERAKIMMKWAELIDENVEELAALDTIDAGKLYHMCKAVDIPTASNTLRYYAGAADKIHGEVLKMSGKFHAYTLMEPIGVVGHIIPWNFPTTMFFLKVSPSLAAGCTMVLKPAEQTPLSALFYAHLAKLAGVPDGVLNVVPGFGPTAGAAISSHMDIDKVSFTGSTEVGREIMQAAAKSNLKQVSLELGGKSPLIIFDDADIDKAADLALLGILFNKGEVCVASSRVFVQEGIYNEFEKKLVEKAKAWVVGDPFDPKSQQGPQVDKNQFEKVLSYIEHGKRQGATLLTGGKTLGNKGYYIQPTIFSDVKEDMLIAQDEIFGPVMALKKFKTIEEAIKSANNTRYGLAAGIVTKNIDTANTMSRSIRAGTIWINCYFAFGDDVPFGGYKMSGFGKDSGLDALHKYLQVKSVVTPIYDSPWL* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1674 499 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Amo02g1674 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 458 IPR016163 GO:0016620
Amo02g1674 499 SUPERFAMILY ALDH-like 15 495 IPR016161 GO:0016491
Amo02g1674 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 23 487 IPR016162 GO:0016491
Amo02g1674 499 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 13 499 - -
Amo02g1674 499 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 13 499 - -
Amo02g1674 499 Pfam Aldehyde dehydrogenase family 32 489 IPR015590 GO:0016491
Amo02g1674 499 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 293 304 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1674 Amo-Chr2 50668007 50682671 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1674 7 499 Aldehyde Dehydrogenase Gene Family AT3G24503 70.200 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1674 K12355 - gmx:100817721 852.432