Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1673 ATGGTTGATAATGGTGTCTCTGATTCCTTATTCAAGATGCCCACCATCAAGTTTACTAAGCTCTTCATCAATGGACACTTTGTTGATTCCATATCAGGGAAGACATTTGAGACAATAGATCCGAGAACAGGAGAGGTAATAGTGAAGATCAGTGAGGGAACTAAAGAAGACATTGATGCTGCTGTTGCAGCGGCGCGTGAGGCATTTGACACTGGTCCATGGCCCCGCATGACCGGAGTTGAAAGAGCAAAAATTATGGTGAAATGGGCAGAGCTTATTGAAGAAAATGGAGAAGAATTAGCGGCATTGGACACCATTGAAGCTGGTTTGCTATACCAATTAACCAAGTTTGGGATTCCCGCAGCAGCGGATATGTTGCGGTACTATGCTGGTGCTGCTGACAAGATTCATGGGGAGGTATTGAAGAGTTCTGGACAGTTCCATGCATACACATTAATGGAACCAATTGGTGTTGTTGGACACATCATCCCTTGGAATGTTCCTCTTATGATGTTCTTCACCAAGGTTGCACCTTCCATTGCAGCTGGCTGCACCATGGTCCTCAAACCCGCTGAACAGACCCCTCTCTCTGCTTTATTTGTTGCTCATCTAGCTAAGCTGGCTGGAGTTCCGGATGGAGTGCTTAATGTAGTACCGGGATTCGGTCCGACTGCAGGTGCTGCAATAAGCTCACACATGGAGATTGATAAGGTTAGCTTTACCGGTTCAGTTGAAACAGGGCGTGAAGTGATGCATGCGGCAGCTAGTAGCAATTTGAAGGCGGTTTCACTTGAATTAGGTGGCAAGTCTCCCCTCATTATTTTTGATGATGCTGATCTTGACAAAGCCGCTGACCTTGCATTCTTCGGCATGTTCTTGAACAAGGGAGAAATATGTGCTGCTGGTTCTCGTGTGTACGTTCAGGAAGGGATCTATGATGAGCTTGAGAAGAAGTTGGTGGAGAAGGCAAAAGCTTGGGTTGTTGGAGATCCTTTTGATCCTAAAACCAACCAAGGACCTCAGGCTGACAAGAACCAATTTGATAAAATTCTTTCCTACATTGAGCATGGAAAGAAAGAGGGAGCTACTCTTTTGACCGGGGGTAAATCCATCGGCACCAAGGGCTACTTCATTGAACCTACAATTTTCTCTCATGTAAAGGAGGACATGCGTATAACTCAGGATGAAATATTTGGCCCCGTGATGACGTTAATGAAGTTTAAGACAATTGAGGAAGCCATTAAGAGGGCAAACAATACAAGATACGGGTTAGCAGCGGGGATAGTGACAAAGAACATAGACACAGCAAACACAATGTCAAGGTCCATTCGCGCAGGCATTGTTTGGATCAATTGCTATTTGATTCTTGAGAGTGACATTCCTTTTGGAGGGTACAAGATAAGTGGATTTGGTGGAAAAGATCTCGGTTTGAATGCACTTCACAAGTACTTGCAACTTAAATCTGTTGTAACTCCCATTTACAATTCTCCTTGGCATTGA 1500 0.4453 MVDNGVSDSLFKMPTIKFTKLFINGHFVDSISGKTFETIDPRTGEVIVKISEGTKEDIDAAVAAAREAFDTGPWPRMTGVERAKIMVKWAELIEENGEELAALDTIEAGLLYQLTKFGIPAAADMLRYYAGAADKIHGEVLKSSGQFHAYTLMEPIGVVGHIIPWNVPLMMFFTKVAPSIAAGCTMVLKPAEQTPLSALFVAHLAKLAGVPDGVLNVVPGFGPTAGAAISSHMEIDKVSFTGSVETGREVMHAAASSNLKAVSLELGGKSPLIIFDDADLDKAADLAFFGMFLNKGEICAAGSRVYVQEGIYDELEKKLVEKAKAWVVGDPFDPKTNQGPQADKNQFDKILSYIEHGKKEGATLLTGGKSIGTKGYFIEPTIFSHVKEDMRITQDEIFGPVMTLMKFKTIEEAIKRANNTRYGLAAGIVTKNIDTANTMSRSIRAGIVWINCYLILESDIPFGGYKISGFGGKDLGLNALHKYLQLKSVVTPIYNSPWH* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1673 499 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 264 271 IPR029510 GO:0016491
Amo02g1673 499 SUPERFAMILY ALDH-like 11 495 IPR016161 GO:0016491
Amo02g1673 499 Pfam Aldehyde dehydrogenase family 28 489 IPR015590 GO:0016491
Amo02g1673 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 268 457 IPR016163 GO:0016620
Amo02g1673 499 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 7 498 - -
Amo02g1673 499 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 292 303 IPR016160 GO:0016491
Amo02g1673 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 23 487 IPR016162 GO:0016491
Amo02g1673 499 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE RF2C 7 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1673 Amo-Chr2 50637953 50643881 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1673 12 498 Aldehyde Dehydrogenase Gene Family AT3G24503 70.552 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1673 K12355 - gmx:100783920 776.933