Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo02g1671 | AGACGGTTCGTTCGTGCAGCTCAAGGAGTCGGTGAGACCCCTTCGTTGGAACTAGAATGCTTGACAAACTACATTGTCGAATTGTCTTTGTTGGAGTACAGTATGCTTTGTTATGCTCCGTCACTAATAACTGCTTCTGCAATTTTTATAGCCAAGTTTATAGTCTCCCCCTCAACCAAATCATGGAATGCTACATTGAAGCACTATACACAATACCGGCCTTCTAATTTGTGTAGTTGTGTAAGGGATCTCCGTCGACTTTGTTGCAACAATCCTAACTCTAATTTTCCTGCAATTAGGGAAAAGTATAGTCAGCACAAGTACAAAAATGTGGCCAAGAAGTATTGCCCTCCCTCAATACCTTCAGAATATTTTTAG | 378 | 0.4101 | RRFVRAAQGVGETPSLELECLTNYIVELSLLEYSMLCYAPSLITASAIFIAKFIVSPSTKSWNATLKHYTQYRPSNLCSCVRDLRRLCCNNPNSNFPAIREKYSQHKYKNVAKKYCPPSIPSEYF* | 126 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo02g1671 | 125 | SMART | Cyclin_C_2 | 1 | 117 | IPR004367 | - | |
| Amo02g1671 | 125 | Pfam | Cyclin, C-terminal domain | 1 | 113 | IPR004367 | - | |
| Amo02g1671 | 125 | SUPERFAMILY | Cyclin-like | 1 | 119 | IPR036915 | - | |
| Amo02g1671 | 125 | PANTHER | CYCLIN-A1-1 | 1 | 125 | - | - | |
| Amo02g1671 | 125 | CDD | CYCLIN | 1 | 84 | IPR013763 | - | |
| Amo02g1671 | 125 | SMART | cyclin_7 | 2 | 86 | IPR013763 | - | |
| Amo02g1671 | 125 | Gene3D | - | 1 | 124 | - | - | |
| Amo02g1671 | 125 | PANTHER | CYCLINS | 1 | 125 | IPR039361 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo02g1671 | Amo-Chr2 | 50259312 | 50260009 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Amo02g1671 | 1 | 125 | Core Cell Cycle Gene Families | AT1G44110 | 62.400 | 5.40e-55 | 176 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo02g1671 | K06627 | - | aip:107648135 | 238.039 |