Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1658 ATGAAGGACAAGGTGATTGTGGAGCCTCTACTCTGTTTTTGCGTCATTTTCCACGACAGATTCTTTTGCTGGTTCTGCTTTTGTTCCGGGGGCTTGAAGCACTTAGAGCACAGTTTTGGCGCGGATGCGGTGGCACTGGCGGAGCAGATCTGGAAGGCAAGCGAGCGGAAGTCTCTGGAAGCTTCGATTGAAGCTGCGATAGTACGATCGAAGCTATCAAACCTTATGGAACTAATTCTCATGTCGTTCCGAGTCATTGAGGGGCTGGTGTTAGTCAAGTTGCAGGCCTGCTATGGTGTTTTGAGGTTTGTTATGGAAAATGGCGCCAAGGGATGCGAGGTCATCGTTAGTGGCAAGTTGAGGGCTCAACGTGCTAAATCCATGAAGTTCAAGGATGGGTACATGATTTTCTCAGGGCAACCAGTCAAGGACTACATTGATTCTGCTGTAAGACATGCATATACGAGCAAGTTGCAGCTTAAAGTGGATCACTTGCTGGAAGAGAATGCAAGACTCAAGAGACAACAACAAAAGGCATGCATCTTCATTTATATACATAAAGACACACATTTTAGTAAATTTATTGCTGAGGTTTCATGCTCCAAAGAATGTAACAAGAAAAATGGGACTTATGCTCAAGCTAACAAGCCTGCATCTGCTGATGATGAAGATATGGACCCCACTCAATACCTTGAGAGCAGGCTCAAGTACCTTGCGGATCAGAAGGCTGAAGGGATTAACCCATACCCACACAACAGAAATGATAGTAGAGTTGGAAGAGTTTGCTTGCTGTATGGGAAGGTTTATAAAGGTATTCTTGTTGACGGTGCTACTGTCACCATAAAACGTGCACAGGAAGTCTCACTGCAAGATGCTGGTTTACGAATATATGCCGAACGGAACGCTAAGGGATCACCTCTCGCAACACCTCTGAGTTTTACAATAAAAATGAAGATTGCTCTAGGATCCACTAAAGTAATATACTATTGGACTCTAAATTCAATGCAAAAGTTGCTGATTTTGGACTTTTGTGACTCGCCCCGGTGCCAGATCTCGAAGGAGTTGTGCCTGGTCATGTATCTACAA 1086 0.4448 MKDKVIVEPLLCFCVIFHDRFFCWFCFCSGGLKHLEHSFGADAVALAEQIWKASERKSLEASIEAAIVRSKLSNLMELILMSFRVIEGLVLVKLQACYGVLRFVMENGAKGCEVIVSGKLRAQRAKSMKFKDGYMIFSGQPVKDYIDSAVRHAYTSKLQLKVDHLLEENARLKRQQQKACIFIYIHKDTHFSKFIAEVSCSKECNKKNGTYAQANKPASADDEDMDPTQYLESRLKYLADQKAEGINPYPHNRNDSRVGRVCLLYGKVYKGILVDGATVTIKRAQEVSLQDAGLRIYAERNAKGSPLATPLSFTIKMKIALGSTKVIYYWTLNSMQKLLILDFCDSPRCQISKELCLVMYLQ 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1658 362 SUPERFAMILY Ribosomal protein S3 C-terminal domain 94 155 IPR036419 -
Amo02g1658 362 Pfam Ribosomal protein S3, C-terminal domain 95 156 IPR001351 GO:0003735|GO:0006412
Amo02g1658 362 Coils Coil 155 175 - -
Amo02g1658 362 PANTHER BNAC06G00510D PROTEIN 81 166 - -
Amo02g1658 362 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 81 166 - -
Amo02g1658 362 Gene3D - 41 190 IPR036419 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1658 Amo-Chr2 49742748 49745866 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1658 81 174 Cytoplasmic Ribosomal Protein Gene Family AT5G35530 60.417 2.26e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1658 K02985 - ahf:112719139 187.578