Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1657 ATGGCTCAGCCGTCATGCTCAGCGGCGCAACTGGCACAATACTTCGGCCCCAACGCCACCAACGCTGCAGCCGCTGCAAGTCTCATCTGCGATCAGTTCACCGCCGTGAGTATGCAGTACAAAGACACCAAGCACGCGGTGGACAGCACCTACCTCCTCTTCTCAGCCTATCTCGTCTTCTCCATGCAGCTCGGCTTCGCCATGCTCTGCGCCGGCTCCGTCCGCGCCAAGAACACCATGAACATCATGCTTACCAACGTCCTCGACGCCGCCGCCGGCGGCCTCTTCTACTACCTATTCGGTTTTGCCTTTGCTTTCGGCGTCCCCTCCAATGGCTTCATCGGCCGCCACTTCTTCGGCCTCAAGCAAGTTCCTTCAGAAGCTCAGGATTTTGACTACAGCAACTTCCTCTACCAGTGGGCCTTCGCCATCGCCGCCGCTGGCATCACCAGCGGCTCTATCGCGGAGCGGACGCAGTTCGTCGCTTACCTCATCTACTCATCCTTCCTCACTGGCTTCGTCTACCCCGTTGTGTCGCATTGGATCTGGTCCACCGATGGGTGGGCCAGTGCCTTCAACACAGGGAACCTCCTCTTCGGATCTGGAGTCATCGATTTTGCGGGATCCGGAGTCGTTCACATGGTCGGTGGCATTGCCGGTTTATGGGGTGCCCTAATTGAGGGGCCCAGAATAGGCCGTTTCGATCACACCGGCCGAGCGGTGGCTTTACGTGGGCACAGTGCATCATTGGTGGTACTTGGTACTTTCATGCTCTGGTTTGGTTGGTATGGATTTAACCCTGGCTCTTTTAACAAGATTCTAGTTTACTACGACGAATCTGGCAATTATTATGGTCAATGGAGTGCTGTTGGTAGGACCGCAGTAACTACAACCTTAGCCGGTTGTACGGCCGCCCTAACAACACTTTTTGGGAAAAGGATATTGTCTGGTCACTGGAACGTGACTGATGTTTGTAACGGGTTGCTAGGCGGGTTCGCAGCGATCACGGCCGGATGCTCTGTCGTGGAGCCTTGGGCTGCAATTGTGTGCGGCTTTTTTGCCTCCTTGGTTTTGATTGGCTGCAATAAATTGGCTGAAAAACTTCATGGCGGCTGCGGCGCGTGGGGTGTGATTTTCACCGCTCTCTTTGCGAAGGAGGAGTATGTGAAACAGGTCTACGGGTCGGGTCGGAGGCACGGGCTGTTGATGGGTGGTGGCGGAAAACTGCTGGCGGCGCATGTGATTCAGATTCTGGTTATTACTGGTTGGGTGAGTGCTACAATGGGTCCACTTTTCTTTGTTTTGAATAAGATGAAGTTGCTTCGGATCTCACCGGAGGATGAACTCGCGGGTATGGATCTGACCCGACATGGTGGGTTTGCTTATGCTTACGAGGACGATGAATCGCACAAGCATGGGATTCAGTTGAAAAGAATTGAGCCAAACGCTTCCTCAACTCCTACCACAGAATGA 1473 0.5418 MAQPSCSAAQLAQYFGPNATNAAAAASLICDQFTAVSMQYKDTKHAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGVPSNGFIGRHFFGLKQVPSEAQDFDYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWIWSTDGWASAFNTGNLLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHTGRAVALRGHSASLVVLGTFMLWFGWYGFNPGSFNKILVYYDESGNYYGQWSAVGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFFASLVLIGCNKLAEKLHGGCGAWGVIFTALFAKEEYVKQVYGSGRRHGLLMGGGGKLLAAHVIQILVITGWVSATMGPLFFVLNKMKLLRISPEDELAGMDLTRHGGFAYAYEDDESHKHGIQLKRIEPNASSTPTTE* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1657 490 Gene3D Ammonium transporter AmtB like domains 26 481 IPR029020 -
Amo02g1657 490 SUPERFAMILY Ammonium transporter 45 443 - -
Amo02g1657 490 ProSitePatterns Ammonium transporters signature. 205 230 IPR018047 GO:0008519|GO:0016020|GO:0072488
Amo02g1657 490 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 1 5 484 - -
Amo02g1657 490 TIGRFAM amt: ammonium transporter 48 462 IPR001905 GO:0008519|GO:0016020|GO:0072488
Amo02g1657 490 PANTHER AMMONIUM TRANSPORTER 5 484 - -
Amo02g1657 490 Pfam Ammonium Transporter Family 51 462 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1657 Amo-Chr2 49564597 49566102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1657 5 488 Inorganic Solute Cotransporters AT4G13510 78.614 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1657 K03320 - gmx:100818774 808.135