Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1624 ATGGCATTCCGCATTCTAGGTATTGGAAAGGCATCACTTTCTGCATCAAAAGGGACTAATATTCCAAAAGGCTATCTTGCAGTCTATGTAGGAGATAAGATGAGGCGGTTTGTGATTCCTGTATGTTACTTGAACCAGCCTTCATTTCAAGGATTACTAAACCAAGCAGAAGAAGAATTCGGATATGATCATCCAACTTGTGGTCTGACAATTCCATGCGGTGAGGATGAACCCCAATTTACAGCTTCATTAAAATTATGTCTTCAGGATAGCAGCTATATATACATTACTTCTTGTGTTCTCAACCAACACAAATCAGTTGCATCTCCTCAAGTATTAGAACTCACATACTTCTCTCAAACAAAATCTTCAATAACAATGGCTTTTCGCATTCCAAGTATTAGAAAGGCTTCACTTTCTTCTATATGGGAGATAAGATGGGCGGAGTTACTAAGCCAATCAGAAGAAGAATTCGGTTATGATCACCCAACTGGCGGTCTCACTATTCCTTGCAGCGAGGATACATTCCTGAACCTCACTTGTCAATTAAGTGGGCACAAAGGAAAAGGCATTCCAAGCTTGAGACATTCCATGATTGAATGTCACAAACTTGAGCAATTTTCTTGTGTTAATAAATCCAAGACCACCAAAAGTCTAATGAGAGGCCACACGATATTACATAATCTCTTAAATAAAGGGATAGGATGCCAAGAGAGGACCACATTTTGTGACTATATCCCAACTTCTTCTGCACTTGGAGGGCATGAAATATGGTTTCAT 780 0.3936 MAFRILGIGKASLSASKGTNIPKGYLAVYVGDKMRRFVIPVCYLNQPSFQGLLNQAEEEFGYDHPTCGLTIPCGEDEPQFTASLKLCLQDSSYIYITSCVLNQHKSVASPQVLELTYFSQTKSSITMAFRIPSIRKASLSSIWEIRWAELLSQSEEEFGYDHPTGGLTIPCSEDTFLNLTCQLSGHKGKGIPSLRHSMIECHKLEQFSCVNKSKTTKSLMRGHTILHNLLNKGIGCQERTTFCDYIPTSSALGGHEIWFH 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1624 260 Pfam Auxin responsive protein 15 75 IPR003676 GO:0009733
Amo02g1624 260 Pfam Auxin responsive protein 148 182 IPR003676 GO:0009733
Amo02g1624 260 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 147 184 IPR003676 GO:0009733
Amo02g1624 260 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 12 78 IPR003676 GO:0009733
Amo02g1624 260 PANTHER AUXIN-INDUCED PROTEIN 10A5 147 184 - -
Amo02g1624 260 PANTHER AUXIN-INDUCED PROTEIN 10A5 12 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1624 Amo-Chr2 47093486 47096954 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1624 20 111 Calmodulin-binding Proteins AT3G43120 39.130 4.28e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1624 - K14488 gmx:112997918 146.362