Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1623 ATGGGTTTTCGTTTATCCGGTATCGTAAGAAAGGCATCATTTACTTCATCTTCAAAAGCTATGGAAGTGCCAAAGGGTTATCTTGCAGTTTACGTTGGAGATAAAATGAAGCGGTTTGTGATCCCTATATCATACTTGAACCTGCCTTCATTTCAAGATTTGCTAAGTCAAGCTGAGGAAGAATTTGGGTATGATCATCCAATGGGTGGTCTCACAATTCCTTGTGAAGAAAATGTATTCTTAGATATCACTTCTCGCTTGAGTTGA 267 0.3858 MGFRLSGIVRKASFTSSSKAMEVPKGYLAVYVGDKMKRFVIPISYLNLPSFQDLLSQAEEEFGYDHPMGGLTIPCEENVFLDITSRLS* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1623 88 Pfam Auxin responsive protein 15 86 IPR003676 GO:0009733
Amo02g1623 88 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 87 IPR003676 GO:0009733
Amo02g1623 88 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1623 Amo-Chr2 47092318 47092584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1623 22 80 Calmodulin-binding Proteins AT3G43120 57.627 5.01e-19 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1623 K14488 - gmx:100786095 142.895