Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1618 ATGTCCATAAACAAGGATGATGTGAAGATTGATTCTGATAATGATTTGGGTGATGATTTCGATTATCAACCAAATGCAGAAGATGATGCTGAAGACGACTATGTGGATTCGCTGGATTCTACTAGCAAGAGTGAAGAAGTCTGTGGTGTAAAAAGAATAGCAGATTTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGATAGAAGATGAGGCTTGCGAATTTTATAACGCTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACGTGGTTAGGGATAATCAAGGTAGAATCATTAGCAGGCAACTTGATTGCAACAAAGAGGGGTGGAGGAATGTGAGGTATCTTGATCTGGATGATAGATCAAGGGAGGCAAGGTCACTAACA 393 0.402 MSINKDDVKIDSDNDLGDDFDYQPNAEDDAEDDYVDSLDSTSKSEEVCGVKRIADLMVEDIWNLEFRIEDEACEFYNAYSCWHGFVMRKDDVVRDNQGRIISRQLDCNKEGWRNVRYLDLDDRSREARSLT 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1618 131 MobiDBLite consensus disorder prediction 1 40 - -
Amo02g1618 131 MobiDBLite consensus disorder prediction 1 16 - -
Amo02g1618 131 MobiDBLite consensus disorder prediction 17 35 - -
Amo02g1618 131 Pfam FAR1 DNA-binding domain 74 119 IPR004330 -
Amo02g1618 131 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 31 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1618 Amo-Chr2 47054810 47055202 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo02g1618 FAR1 1.3e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1618 - - adu:107460934 259.61