Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1596 ATGGAAGGTCTAGCACTAGGAGACGACCCACTTAGCGACTTCGATTGTGACGCCTTTCTCGAACAATTACCAGATCCTCACGTTGACGATATCTTCCATGAGAAGGAGGTTCCTTCTGCCTTAGCAGGTGGCGGTGTTTTATCAGAGATCGAGAACTTGTTGATGGCCGATGATGAAGACGACTGTGCTGTCATTCCCGCTACTCCGTCGTTGGAATCTGACTACGACAAGCTTCTTGCTGAAATACTCGTCGAGCCGCACGGTGACTCCGACGACGGTTCCACTCCTTCTATCGAAGATCCCCACAAGGACAGGGCTGATGCAGCGGGCCCCAAGGAGGTTGGCATTGAACCCGTTTCGAAGAAGCTATTAAGGAAAATGAGGAACAGAGATGCTGCTGCGAGATCAAGAGAGAGGAAGACGAAGTATGTAAAGGACCTTGAGATGAAAAGTAGGTATTATGAAGGGGAATGCCGTAGACTGGGGCATTTGCTCCAGTGCTGCTATGCTGAGAACCATGCTTTGCGTCTTTGCTTACAGGCACGAGGTGCATTGAATGCTTCCATGACCAAGCAGGAGTCTGCTGTGCTCTTGTTGGAATCCCTGCTGTTGGGTTCCCTGCTGTTGTTCATGGGTGTCATGTGCCAATTCAGTCTACGACTGACAGCCTGGTTAACGGTACTACTTCCAAGAGAAAACAAGGAGCAGAGAAACGCAAGAAGGGTAGCTCGAAAAGGACCCGAAAGTGATATATCTGAGTGTTTCTGGGTGCAATCCTCTACAAAGAGTAGAAGTTGTCGGGCTTCAAGGAGAAAGATGAAATTCTTTATTTCTTCTCTGTCGTTATTTTATTCTAGTATATATATTAGAAGGGGAGGACGAAAAGAGAAGAAAAGAGAGAGAGAGAAAGGGGGGGGGGGTGTTATATTGTGCAGATGGAGTGATTACAATAGACAAAAAACTGAAAGAATTGTTTAA 978 0.4693 MEGLALGDDPLSDFDCDAFLEQLPDPHVDDIFHEKEVPSALAGGGVLSEIENLLMADDEDDCAVIPATPSLESDYDKLLAEILVEPHGDSDDGSTPSIEDPHKDRADAAGPKEVGIEPVSKKLLRKMRNRDAAARSRERKTKYVKDLEMKSRYYEGECRRLGHLLQCCYAENHALRLCLQARGALNASMTKQESAVLLLESLLLGSLLLFMGVMCQFSLRLTAWLTVLLPRENKEQRNARRVARKGPESDISECFWVQSSTKSRSCRASRRKMKFFISSLSLFYSSIYIRRGGRKEKKREREKGGGGVILCRWSDYNRQKTERIV* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1596 325 MobiDBLite consensus disorder prediction 86 112 - -
Amo02g1596 325 Pfam bZIP transcription factor 120 159 IPR004827 GO:0003700|GO:0006355
Amo02g1596 325 CDD bZIP_HY5-like 122 173 - -
Amo02g1596 325 PANTHER BZIP TRANSCRIPTION FACTOR 60 13 281 - -
Amo02g1596 325 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 13 281 - -
Amo02g1596 325 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 119 161 IPR004827 GO:0003700|GO:0006355
Amo02g1596 325 SMART brlzneu 117 181 IPR004827 GO:0003700|GO:0006355
Amo02g1596 325 MobiDBLite consensus disorder prediction 86 111 - -
Amo02g1596 325 Gene3D - 120 181 - -
Amo02g1596 325 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 125 139 IPR004827 GO:0003700|GO:0006355
Amo02g1596 325 SUPERFAMILY Leucine zipper domain 121 177 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1596 Amo-Chr2 46173339 46176081 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1596 134 281 bZIP Transcription Factor Family AT1G42990 45.033 7.27e-17 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo02g1596 bZIP_1 4.5e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1596 - - ahf:112743660 607.831