Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g1554 AGAATAATGGAATTGATAGAGAAAGTAGTTGTTTATCCCGAGCAATCCACTCTTAATAAGCGAATTTTCTTGTCCAATATCGACTTATGTCTTGTTGTTTACCAAGATAATGTCTTCTTCTTTGATTCTCCAAGTAGCGAAATGAGTTTTTCTGAAATTTTCAATAAATTATGTAATGCATTTGGTAAATTGCTTATGCATTATAACTTTATGGCTGGCCGACATGTGCAAAGTTTGGAGGACAGTCATCGATTTGAAATAGACTGTAATGATGCTGGTATTGTGGTTATTGCTGCAAGAACTAATAGAAAGTTGAGTGAATTTGGTGATATTTTTGCACCTAATCAAGATTTAGAGGAATTGGCTATGTTCCTCCAAGAAGAACAGGAAGAAGAAATCGATTTGAAAGAGAAACTCCTTTTATCGGTACAGTTGACGCAATTTGCTTGCGGGAGTTTGGCACTAACTACTCACTACAATCACTGTACACTAGACGGTTTAGCAGTAAGAGATTTTGGGGCAAACTTGGCTGCATTAACACGTGGTGATTTTCTAATCGTAGTTCCTTTTGCAGATAGGACATTGCTAAGAGCAAGAAACCCACCAAAGATTAGTTACCCACATTTTGAGTATGGAAAAGCTACAAACATTGAAAACTTGTTTAGTGTTCGTGGAACAAGTAGTGGCATTAATGTAAGACAGAATGCAATACAAAACCAAATCCAGATTCTTTATTTGTCTCCACAACAAATTGCCAGCTTTAAAATGAAAGCTATTAAGGATTGTAAATTAAAGAATGTGACTACTTTTCATGTTGTTGCCGGTAAAATATGGAAGGCGAGAACTATTGCGATGAATATGTCAGATGATCAAGTGTCGACAATGTTGTTTCCTGTGGATATTAGGAAAAGAGTTTCTCCAGAACTTTCATACGGCTTTGCAGGCAAGGATGAAATACATATGAGAATATTTTTAACAAAAAAATGCAATGCTTTGGTTCCTGGATTTGCAAGAGCAACTGTGAAGGAGCTCACAGAATTAGAGGATGCTTATCATATAAAAAAAGTACAAGAAGGAATTGAAAGGTTGGATAATGAGTATATTAAATCAAGCATAGATTGGTTAGAATTGAACAAAGGAGTGCCTCGTAGGGAAGATAGCTTCTCATTGGTTTCAGGGTTGAGATTGGGGCTTGAGGACCAATATTTTGCATGGGGTAAACTAAAATGTTCAACACCACTTACTGTTAAGCCAGGTCTAGTCATGCTATTACCAACAGCACCAGGTGATGGAGGTCTTAATGTCTGTCTGGATTTACCAAAAGATCAAATGTACATATTTCGTAGGATAATGTTGGAATTCTAA 1365 0.3634 RIMELIEKVVVYPEQSTLNKRIFLSNIDLCLVVYQDNVFFFDSPSSEMSFSEIFNKLCNAFGKLLMHYNFMAGRHVQSLEDSHRFEIDCNDAGIVVIAARTNRKLSEFGDIFAPNQDLEELAMFLQEEQEEEIDLKEKLLLSVQLTQFACGSLALTTHYNHCTLDGLAVRDFGANLAALTRGDFLIVVPFADRTLLRARNPPKISYPHFEYGKATNIENLFSVRGTSSGINVRQNAIQNQIQILYLSPQQIASFKMKAIKDCKLKNVTTFHVVAGKIWKARTIAMNMSDDQVSTMLFPVDIRKRVSPELSYGFAGKDEIHMRIFLTKKCNALVPGFARATVKELTELEDAYHIKKVQEGIERLDNEYIKSSIDWLELNKGVPRREDSFSLVSGLRLGLEDQYFAWGKLKCSTPLTVKPGLVMLLPTAPGDGGLNVCLDLPKDQMYIFRRIMLEF* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g1554 454 Pfam Transferase family 4 448 - -
Amo02g1554 454 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE-LIKE ISOFORM X1 4 452 - -
Amo02g1554 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 452 - -
Amo02g1554 454 Gene3D - 233 454 IPR023213 -
Amo02g1554 454 Coils Coil 115 135 - -
Amo02g1554 454 Gene3D - 3 213 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g1554 Amo-Chr2 42199348 42202090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g1554 7 453 Monolignol Biosynthesis Gene Families AT5G48930 26.316 2.29e-50 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g1554 K15400 K13065 gmx:100801822 573.163